C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: patatin-like phospholipase domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111070 Pnpla6-202 ENSMUSG00000004565 10090 + 8:3515384-3544266 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111070
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111070 5.263±0.83 2.990±0.38 4.408±0.08 4.696±1.70 4.975±1.73 0.871±0.35 4.289±1.69 1.972±0.62 2.781±0.18 0.387±0.02 5.424±1.69 5.277±0.40 1.794±0.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0004622 IEA lysophospholipase activity
GO:0005783 IEA endoplasmic reticulum
GO:0009887 IMP organ morphogenesis
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016042 IEA lipid catabolic process
GO:0046470 IEA phosphatidylcholine metabolic process
GO:0052689 ISS carboxylic ester hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221249 PNPLA6-001 protein_coding Homo_sapiens 0 4405
ENST00000414982 PNPLA6-002 protein_coding Homo_sapiens 0 4366
ENST00000450331 PNPLA6-004 protein_coding Homo_sapiens 0 4405
ENST00000545201 PNPLA6-003 protein_coding Homo_sapiens 0 2850
ENST00000593924 PNPLA6-008 protein_coding Homo_sapiens 0 438
ENST00000594864 PNPLA6-020 processed_transcript Homo_sapiens 0 597
ENST00000595176 PNPLA6-018 retained_intron Homo_sapiens 0 953
ENST00000595352 PNPLA6-022 retained_intron Homo_sapiens 0 267
ENST00000595889 PNPLA6-017 retained_intron Homo_sapiens 0 623
ENST00000596515 PNPLA6-010 protein_coding Homo_sapiens 4e-39 165
ENST00000599311 PNPLA6-019 retained_intron Homo_sapiens 0 462
ENST00000599947 PNPLA6-024 protein_coding Homo_sapiens 0 250
ENST00000599951 PNPLA6-021 retained_intron Homo_sapiens 0 412
ENST00000600737 PNPLA6-012 protein_coding Homo_sapiens 0 4379
ENST00000600942 PNPLA6-009 protein_coding Homo_sapiens 0 527
ENST00000601001 PNPLA6-011 protein_coding Homo_sapiens 0 612
ENST00000601668 PNPLA6-005 protein_coding Homo_sapiens 0 477
ENST00000601870 CTD-2207O23.10-001 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000602191 PNPLA6-013 retained_intron Homo_sapiens 0 351

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