C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: patatin-like phospholipase domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000600737 PNPLA6-012 ENSG00000032444 9606 + 19:7535706-7561576 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000600737
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000600737 12.142±0.00 15.517±0.00 1.285±0.00 14.473±9.82 6.923±5.98 6.744±5.76 4.335±3.64 21.313±0.00 8.323±0.00 9.869±6.15 23.133±0.00 9.578±9.26 10.973±4.07 25.862±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043C CIL_00043C_0001 CGP 19:7515292-7534009

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004622 IEA lysophospholipase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006629 IEA lipid metabolic process
GO:0008152 IEA metabolic process
GO:0008219 IEA cell death
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016042 IEA lipid catabolic process
GO:0046470 IEA phosphatidylcholine metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111070 Pnpla6-202 protein_coding Mus_musculus 0 4379
ENSMUST00000004681 Pnpla6-201 protein_coding Mus_musculus 0 4379
ENSDART00000049716 pnpla6-201 protein_coding Danio_rerio 0 955
ENSDART00000140890 pnpla6-001 protein_coding Danio_rerio 0 955
ENSDART00000139219 pnpla6-002 protein_coding Danio_rerio 0 342
ENSDART00000144735 pnpla6-003 protein_coding Danio_rerio 0 226

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