C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type XXVI, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111103 Col26a1-004 ENSMUSG00000004415 10090 - 5:136741759-136883184 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111103
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111103 4.172±0.42 0.091±0.00 9.224±6.15 0.372±0.14 0.088±0.06 0.159±0.00 2.305±0.09 0.532±0.60 0.211±0.04 0.290±0.00 4.310±1.78 0.930±0.90 2.396±1.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005O9 CIL_0005O9_0002 CGP 5:136693146-136883209

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005581 IEA collagen trimer
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0010811 IDA positive regulation of cell-substrate adhesion

Homologs

No Homologs available.

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