C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111329 Arhgap1-002 ENSMUSG00000027247 10090 + 2:91649860-91672326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111329
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111329 17.384±5.12 4.911±0.33 12.715±3.13 7.129±0.64 10.375±2.13 3.622±0.11 6.662±1.42 3.732±1.96 9.125±0.84 0.528±0.16 17.259±3.94 12.072±0.30 2.277±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000182 CIL_000182_0002 CGP 2:91649860-91710576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IDA ruffle
GO:0005100 IDA Rho GTPase activator activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007165 IEA signal transduction
GO:0017124 IEA SH3 domain binding
GO:0030675 IDA Rac GTPase activator activity
GO:0031252 IDA cell leading edge
GO:0032321 IDA positive regulation of Rho GTPase activity
GO:0032855 IDA positive regulation of Rac GTPase activity
GO:0043087 IDA regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311956 ARHGAP1-001 protein_coding Homo_sapiens 0 1701
ENST00000524594 ARHGAP1-002 retained_intron Homo_sapiens 0 313
ENST00000525488 ARHGAP1-006 protein_coding Homo_sapiens 0 756
ENST00000526423 ARHGAP1-004 retained_intron Homo_sapiens 0 588
ENST00000527588 ARHGAP1-005 retained_intron Homo_sapiens 0 418
ENST00000528837 ARHGAP1-007 protein_coding Homo_sapiens 0 881
ENST00000529960 ARHGAP1-003 retained_intron Homo_sapiens 0 418

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