C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/threonine kinase 38 like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111644 Stk38l-002 ENSMUSG00000001630 10090 + 6:146725036-146776556 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111644
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111644 2.321±0.37 0.879±0.28 1.938±0.24 1.187±0.44 1.859±0.73 4.157±0.58 1.291±0.33 1.112±0.22 1.077±0.21 1.633±0.59 0.793±0.10 1.861±0.77 4.035±2.52 2.177±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056J CIL_00056J_0002 CGP 6:146724995-146833529

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 ISS magnesium ion binding
GO:0003779 IEA actin binding
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005524 ISS ATP binding
GO:0005737 IDA cytoplasm
GO:0006468 ISS protein phosphorylation
GO:0015629 IDA actin cytoskeleton
GO:0016020 IEA membrane
GO:0035556 ISS intracellular signal transduction
GO:0051128 IDA regulation of cellular component organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389032 STK38L-001 protein_coding Homo_sapiens 0 1794
ENST00000434385 STK38L-010 retained_intron Homo_sapiens 0 230
ENST00000536093 STK38L-003 nonsense_mediated_decay Homo_sapiens 0 736
ENST00000539863 STK38L-011 retained_intron Homo_sapiens 0 302
ENST00000540996 STK38L-007 protein_coding Homo_sapiens 0 422
ENST00000541191 STK38L-004 protein_coding Homo_sapiens 0 551
ENST00000543246 STK38L-005 protein_coding Homo_sapiens 0 551
ENST00000543992 STK38L-002 retained_intron Homo_sapiens 0 466
ENST00000544367 STK38L-009 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000544969 STK38L-006 protein_coding Homo_sapiens 0 551
ENST00000545470 STK38L-012 protein_coding Homo_sapiens 0 302
ENST00000546286 STK38L-008 nonsense_mediated_decay Homo_sapiens 0 228

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