C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00056J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000211455-ENSG00000029153 CGP 9606 12:27243968-27425289
GeneTranscriptPositionBiotype
ENSG00000029153 (ARNTL2)
aryl hydrocarbon receptor nuclear translocator-like 2 		ENST00000261178 (ARNTL2-006) 27333055-27420590 protein_coding
ENST00000266503 (ARNTL2-001) 27333055-27420894 protein_coding
ENST00000311001 (ARNTL2-005) 27333055-27420533 protein_coding
ENST00000395901 (ARNTL2-004) 27332920-27420533 protein_coding
ENST00000457040 (ARNTL2-008) 27368295-27420725 protein_coding
ENST00000539558 (ARNTL2-009) 27368317-27377503 processed_transcript
ENST00000542388 (ARNTL2-007) 27368336-27420590 protein_coding
ENST00000544915 (ARNTL2-002) 27332854-27425289 protein_coding
ENST00000546179 (ARNTL2-003) 27332920-27420549 protein_coding
ENSG00000211455 (STK38L)
serine/threonine kinase 38 like 		ENST00000389032 (STK38L-001) 27244175-27325959 protein_coding
ENST00000407753 (STK38L-013) 27302136-27315350 nonsense_mediated_decay
ENST00000434385 (STK38L-010) 27244286-27298419 retained_intron
ENST00000536093 (STK38L-003) 27314563-27322934 nonsense_mediated_decay
ENST00000539863 (STK38L-011) 27244267-27302506 retained_intron
ENST00000540996 (STK38L-007) 27244293-27308435 protein_coding
ENST00000541191 (STK38L-004) 27243968-27309197 protein_coding
ENST00000543246 (STK38L-005) 27245657-27309197 protein_coding
ENST00000543992 (STK38L-002) 27317582-27322683 retained_intron
ENST00000544367 (STK38L-009) 27244255-27312663 nonsense_mediated_decay
ENST00000544969 (STK38L-006) 27293628-27309197 protein_coding
ENST00000545470 (STK38L-012) 27244233-27315106 protein_coding
ENST00000546286 (STK38L-008) 27244308-27309197 nonsense_mediated_decay
CIL_00056J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001630-ENSMUSG00000040187 CGP 10090 6:146724995-146833529
GeneTranscriptPositionBiotype
ENSMUSG00000001630 (Stk38l)
serine/threonine kinase 38 like 		ENSMUST00000001675 (Stk38l-001) 146724995-146778812 protein_coding
ENSMUST00000111644 (Stk38l-002) 146725036-146776556 protein_coding
ENSMUSG00000040187 (Arntl2)
aryl hydrocarbon receptor nuclear translocator-like 2 		ENSMUST00000080530 (Arntl2-201) 146805530-146832646 protein_coding
ENSMUST00000111636 (Arntl2-003) 146805530-146832646 protein_coding
ENSMUST00000111638 (Arntl2-005) 146805530-146832646 protein_coding
ENSMUST00000111639 (Arntl2-001) 146796065-146833529 protein_coding
ENSMUST00000123444 (Arntl2-002) 146796055-146805578 processed_transcript
ENSMUST00000129788 (Arntl2-004) 146805530-146832646 nonsense_mediated_decay
ENSMUST00000136594 (Arntl2-006) 146820431-146823154 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056J_0001ENSG00000029153ENST00000261178ENST00000266503ENST00000311001ENST00000395901ENST00000457040ENST00000539558ENST00000542388ENST00000544915ENST00000546179ENSG00000211455ENST00000389032ENST00000407753ENST00000434385ENST00000536093ENST00000539863ENST00000540996ENST00000541191ENST00000543246ENST00000543992ENST00000544367ENST00000544969ENST00000545470ENST00000546286CIL_00056J_0002ENSMUSG00000001630ENSMUST00000001675ENSMUST00000111644ENSMUSG00000040187ENSMUST00000080530ENSMUST00000111636ENSMUST00000111638ENSMUST00000111639ENSMUST00000123444ENSMUST00000129788ENSMUST00000136594
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056J_0001ENSG00000029153ENST00000261178ENST00000266503ENST00000311001ENST00000395901ENST00000542388ENST00000544915ENSG00000211455ENST00000389032ENST00000536093ENST00000543246ENST00000545470CIL_00056J_0002ENSMUSG00000001630ENSMUST00000001675ENSMUST00000111644ENSMUSG00000040187ENSMUST00000080530ENSMUST00000111636ENSMUST00000111638ENSMUST00000111639ENSMUST00000123444ENSMUST00000129788ENSMUST00000136594
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000029153 ENST00000261178 N/A N/A 0.154±0.00 0.883±0.00 0.558±0.16 0.710±0.00 0.303±0.00 N/A N/A N/A N/A 5.284±0.00 N/A N/A
ENST00000266503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.320±0.04 N/A
ENST00000311001 0.500±0.00 N/A N/A 0.730±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395901 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.313±0.00 N/A N/A N/A N/A
ENST00000457040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542388 N/A N/A N/A 1.314±0.00 N/A 0.634±0.00 0.120±0.00 0.434±0.00 0.681±0.07 0.467±0.00 0.334±0.00 3.032±2.55 1.037±0.31 0.982±0.02
ENST00000544915 0.782±0.00 N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.863±0.29 0.227±0.00 0.649±0.00
ENST00000546179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000211455 ENST00000389032 6.851±0.00 0.943±0.00 0.584±0.00 3.591±1.43 6.228±0.96 7.438±1.17 7.361±1.59 4.252±0.00 5.152±4.62 3.985±0.00 1.862±0.00 7.719±4.84 2.771±0.80 6.155±1.20
ENST00000407753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.214±0.00
ENST00000539863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.543±0.00 N/A N/A N/A
ENST00000543992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545470 N/A N/A N/A N/A 4.562±0.00 N/A N/A N/A N/A 3.497±0.00 0.763±0.00 N/A N/A N/A
ENST00000546286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001630 ENSMUST00000001675 2.462±0.65 1.393±0.64 5.074±0.54 2.458±0.65 0.740±0.48 3.185±1.42 1.285±0.39 1.392±0.39 1.626±0.55 1.690±1.00 2.366±0.20 2.195±0.94 2.171±0.70 0.919±0.33
ENSMUST00000111644 2.321±0.37 0.879±0.28 1.938±0.24 1.187±0.44 1.859±0.73 4.157±0.58 1.291±0.33 1.112±0.22 1.077±0.21 1.633±0.59 0.793±0.10 1.861±0.77 4.035±2.52 2.177±0.55
ENSMUSG00000040187 ENSMUST00000080530 N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 0.286±0.00 N/A N/A N/A N/A
ENSMUST00000111636 N/A N/A N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A
ENSMUST00000111638 N/A N/A N/A N/A N/A 0.400±0.10 N/A N/A N/A N/A 0.163±0.00 N/A N/A N/A
ENSMUST00000111639 0.594±0.30 0.306±0.02 3.747±0.72 0.319±0.06 0.513±0.18 0.254±0.12 0.133±0.07 N/A 0.131±0.05 0.222±0.12 0.238±0.00 0.629±0.15 0.162±0.00 0.133±0.11
ENSMUST00000123444 7.182±0.00 1.891±0.33 N/A N/A N/A 2.259±0.57 N/A N/A 0.562±0.16 N/A N/A 7.026±4.17 N/A N/A
ENSMUST00000129788 0.949±0.00 N/A N/A 0.448±0.00 1.299±0.38 N/A N/A 0.220±0.00 0.198±0.13 0.215±0.06 0.246±0.11 0.354±0.16 0.204±0.13 0.344±0.04
ENSMUST00000136594 N/A N/A N/A 2.452±0.00 N/A 0.488±0.05 N/A N/A N/A N/A N/A 1.079±0.36 0.697±0.00 0.335±0.00

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