C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuralized homolog 1A (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111807 Neurl1a-201 ENSMUSG00000006435 10090 + 19:47228843-47259440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000111807
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000111807 0.880±0.85 4.844±1.51 9.942±0.84 2.840±1.18 4.770±5.76 2.158±0.49 0.347±0.21 0.431±0.20 0.194±0.14 1.769±0.55 51.428±8.66 3.144±1.68 0.287±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006T9 CIL_0006T9_0002 CGP 19:47178820-47464411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006417 IEA regulation of translation
GO:0006513 IDA protein monoubiquitination
GO:0007219 IEA Notch signaling pathway
GO:0007288 IMP sperm axoneme assembly
GO:0007595 IMP lactation
GO:0008270 IEA zinc ion binding
GO:0008285 ISS negative regulation of cell proliferation
GO:0014069 IDA postsynaptic density
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0030317 IMP sperm motility
GO:0043065 ISS positive regulation of apoptotic process
GO:0043197 IDA dendritic spine
GO:0043204 IDA perikaryon
GO:0045183 IDA translation factor activity, non-nucleic acid binding
GO:0045211 IEA postsynaptic membrane
GO:0045741 IMP positive regulation of epidermal growth factor-activated receptor activity
GO:0045746 ISS negative regulation of Notch signaling pathway
GO:0048170 IDA positive regulation of long-term neuronal synaptic plasticity
GO:0051491 IDA positive regulation of filopodium assembly
GO:0060999 IDA positive regulation of dendritic spine development
GO:0071230 IDA cellular response to amino acid stimulus
GO:0090129 IDA positive regulation of synapse maturation
GO:0097440 IDA apical dendrite

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369780 NEURL1-001 protein_coding Homo_sapiens 0 2259
ENST00000437579 NEURL1-002 protein_coding Homo_sapiens 0 854
ENST00000455386 NEURL1-003 protein_coding Homo_sapiens 0 623
ENST00000465048 NEURL1-004 processed_transcript Homo_sapiens 0 187

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