C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuralized E3 ubiquitin protein ligase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369780 NEURL1-001 ENSG00000107954 9606 + 10:103493979-103592552 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverLungOvaryPlacentaTestisENST00000369780
Transcript ID Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000369780 5.039±2.69 0.054±0.00 0.389±0.37 0.051±0.00 0.077±0.00 0.994±0.65 1.999±0.88 3.230±1.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006T9 CIL_0006T9_0001 CGP 10:103493979-103855543

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006417 IEA regulation of translation
GO:0006513 ISS protein monoubiquitination
GO:0007219 IEA Notch signaling pathway
GO:0007288 IEA sperm axoneme assembly
GO:0007399 TAS nervous system development
GO:0007595 IEA lactation
GO:0008270 IEA zinc ion binding
GO:0008285 IDA negative regulation of cell proliferation
GO:0014069 ISS postsynaptic density
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0030317 IEA sperm motility
GO:0043065 IDA positive regulation of apoptotic process
GO:0043197 ISS dendritic spine
GO:0043204 ISS perikaryon
GO:0045183 ISS translation factor activity, non-nucleic acid binding
GO:0045211 IEA postsynaptic membrane
GO:0045741 IEA positive regulation of epidermal growth factor-activated receptor activity
GO:0045746 IDA negative regulation of Notch signaling pathway
GO:0048170 ISS positive regulation of long-term neuronal synaptic plasticity
GO:0051491 ISS positive regulation of filopodium assembly
GO:0060999 ISS positive regulation of dendritic spine development
GO:0071230 ISS cellular response to amino acid stimulus
GO:0090129 ISS positive regulation of synapse maturation
GO:0097440 ISS apical dendrite

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111808 Neurl1a-202 protein_coding Mus_musculus 0 2510
ENSMUST00000111807 Neurl1a-201 protein_coding Mus_musculus 0 2259

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