C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuralized homolog 1A (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111808 Neurl1a-202 ENSMUSG00000006435 10090 + 19:47178820-47259440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000111808
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000111808 0.584±0.01 2.068±0.83 2.835±0.41 8.511±7.64 0.129±0.04 2.460±0.39 0.138±0.00 0.214±0.07 0.158±0.09 0.919±0.15 1.361±0.53 0.272±0.12 9.751±4.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006T9 CIL_0006T9_0002 CGP 19:47178820-47464411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006417 IEA regulation of translation
GO:0006513 IDA protein monoubiquitination
GO:0007219 IEA Notch signaling pathway
GO:0007288 IMP sperm axoneme assembly
GO:0007595 IMP lactation
GO:0008270 IEA zinc ion binding
GO:0008285 ISS negative regulation of cell proliferation
GO:0014069 IDA postsynaptic density
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0030317 IMP sperm motility
GO:0043065 ISS positive regulation of apoptotic process
GO:0043197 IDA dendritic spine
GO:0043204 IDA perikaryon
GO:0045183 IDA translation factor activity, non-nucleic acid binding
GO:0045211 IEA postsynaptic membrane
GO:0045741 IMP positive regulation of epidermal growth factor-activated receptor activity
GO:0045746 ISS negative regulation of Notch signaling pathway
GO:0048170 IDA positive regulation of long-term neuronal synaptic plasticity
GO:0051491 IDA positive regulation of filopodium assembly
GO:0060999 IDA positive regulation of dendritic spine development
GO:0071230 IDA cellular response to amino acid stimulus
GO:0090129 IDA positive regulation of synapse maturation
GO:0097440 IDA apical dendrite

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369780 NEURL1-001 protein_coding Homo_sapiens 0 2510
ENST00000437579 NEURL1-002 protein_coding Homo_sapiens 0 752
ENST00000455386 NEURL1-003 protein_coding Homo_sapiens 0 623
ENST00000465048 NEURL1-004 processed_transcript Homo_sapiens 0 187

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