C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium homeostasis modulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111813 Calhm1-201 ENSMUSG00000079258 10090 - 19:47141035-47144174 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000111813
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000111813 0.054±0.00 0.066±0.02 0.031±0.00 0.076±0.05 0.050±0.02 0.027±0.00 0.018±0.00 0.032±0.00 0.097±0.01 0.021±0.02 0.058±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000660 CIL_000660_0002 CGP 19:47105353-47144174
CIL_00065Z CIL_00065Z_0002 CGP 19:47141035-47157764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005227 ISS calcium activated cation channel activity
GO:0005244 IMP voltage-gated ion channel activity
GO:0005262 IEA calcium channel activity
GO:0005783 IEA endoplasmic reticulum
GO:0005887 ISS integral component of plasma membrane
GO:0006812 ISS cation transport
GO:0015867 IMP ATP transport
GO:0034765 ISS regulation of ion transmembrane transport
GO:0042802 IEA identical protein binding
GO:0050913 IMP sensory perception of bitter taste
GO:0050916 IMP sensory perception of sweet taste
GO:0050917 IMP sensory perception of umami taste
GO:0051260 ISS protein homooligomerization
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000113410 calhm1-001 protein_coding Danio_rerio 5e-36 156
ENST00000329905 CALHM1-001 protein_coding Homo_sapiens 0 1061

Loading