C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium homeostasis modulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329905 CALHM1-001 ENSG00000185933 9606 - 10:103453387-103458888 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000329905
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000329905 0.013±0.00 0.049±0.00 0.456±0.13 0.066±0.05 0.042±0.02 0.040±0.00 0.029±0.00 0.077±0.00 0.026±0.01 0.026±0.00 0.028±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000660 CIL_000660_0001 CGP 10:103446786-103458888
CIL_00065Z CIL_00065Z_0001 CGP 10:103453387-103479240

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005227 IDA calcium activated cation channel activity
GO:0005244 IDA voltage-gated ion channel activity
GO:0005262 IEA calcium channel activity
GO:0005783 IEA endoplasmic reticulum
GO:0005887 IDA integral component of plasma membrane
GO:0006812 IDA cation transport
GO:0015867 ISS ATP transport
GO:0034765 IDA regulation of ion transmembrane transport
GO:0042802 IPI identical protein binding
GO:0050913 ISS sensory perception of bitter taste
GO:0050916 ISS sensory perception of sweet taste
GO:0050917 ISS sensory perception of umami taste
GO:0051260 IDA protein homooligomerization
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111813 Calhm1-201 protein_coding Mus_musculus 0 1061
ENSDART00000113410 calhm1-001 protein_coding Danio_rerio 3e-32 145
ENSMUST00000113229 Mob1b-001 protein_coding Mus_musculus 0.00006 55
ENSMUST00000162580 Bscl2-005 retained_intron Mus_musculus 0.00006 55

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