C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 71
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111816 Trim71-001 ENSMUSG00000079259 10090 - 9:114507133-114564369 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000111816
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000111816 0.005±0.00 0.006±0.00 0.171±0.00 0.078±0.04 0.004±0.00 0.022±0.01 0.322±0.40 0.048±0.01 0.164±0.10 2.951±1.79 0.445±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IMP G1/S transition of mitotic cell cycle
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0001843 IMP neural tube closure
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0008270 IEA zinc ion binding
GO:0008543 IMP fibroblast growth factor receptor signaling pathway
GO:0010586 IDA miRNA metabolic process
GO:0016874 IEA ligase activity
GO:0021915 IDA neural tube development
GO:0035198 IDA miRNA binding
GO:0035278 IMP negative regulation of translation involved in gene silencing by miRNA
GO:0051246 IDA regulation of protein metabolic process
GO:0051865 IDA protein autoubiquitination
GO:0060964 IGI regulation of gene silencing by miRNA
GO:0071310 IDA cellular response to organic substance
GO:0072089 IMP stem cell proliferation
GO:2000177 IMP regulation of neural precursor cell proliferation
GO:2000637 IDA positive regulation of gene silencing by miRNA

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000383763 TRIM71-001 protein_coding Homo_sapiens 0 2745

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