C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ets variant 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111963 Etv6-002 ENSMUSG00000030199 10090 + 6:134035700-134270158 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111963
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111963 3.152±0.73 1.236±0.14 6.740±0.33 1.558±0.55 3.090±0.63 2.695±0.72 1.229±0.37 2.427±0.78 1.097±0.34 2.616±0.43 0.996±0.27 5.851±2.71 2.389±0.47 0.933±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000K4 CIL_0000K4_0002 CGP 6:134035700-134438736

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IBA nucleus
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0030154 IDA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266427 ETV6-005 protein_coding Homo_sapiens 8.00001e-41 169
ENST00000396373 ETV6-001 protein_coding Homo_sapiens 0 1829
ENST00000541426 ETV6-003 processed_transcript Homo_sapiens 0 220
ENST00000544715 ETV6-002 processed_transcript Homo_sapiens 0 202
ENST00000545027 ETV6-004 protein_coding Homo_sapiens 0 331

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