C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GDP-mannose pyrophosphorylase B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112295 Gmppb-001 ENSMUSG00000070284 10090 + 9:108049289-108052801 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000112295
Transcript ID Placenta
ENSMUST00000112295 4.518±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GV CIL_0007GV_0002 CGP 9:108002501-108052801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004475 IEA mannose-1-phosphate guanylyltransferase activity
GO:0005525 IEA GTP binding
GO:0005737 ISS cytoplasm
GO:0005739 IDA mitochondrion
GO:0009298 IEA GDP-mannose biosynthetic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308375 GMPPB-002 protein_coding Homo_sapiens 0 1327
ENST00000308388 GMPPB-003 protein_coding Homo_sapiens 0 1620
ENST00000327697 RNF123-001 protein_coding Homo_sapiens 3e-34 152
ENST00000433785 RNF123-007 protein_coding Homo_sapiens 1e-34 152
ENST00000457726 RNF123-003 nonsense_mediated_decay Homo_sapiens 3e-34 152
ENST00000480687 GMPPB-001 protein_coding Homo_sapiens 0 1568
ENST00000481959 GMPPB-004 retained_intron Homo_sapiens 0 322
ENST00000486102 RNF123-005 retained_intron Homo_sapiens 3e-34 152
ENST00000487805 RNF123-006 retained_intron Homo_sapiens 4e-34 152
ENST00000495627 GMPPB-005 retained_intron Homo_sapiens 0 416
ENST00000498376 RNF123-014 retained_intron Homo_sapiens 5e-35 152

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