C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 123
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487805 RNF123-006 ENSG00000164068 9606 + 3:49689565-49721527 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000487805
Transcript ID Liver
ENST00000487805 0.846±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NE CIL_0005NE_0002 CGP 3:49689499-49721529

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047746 Rnf123-201 protein_coding Mus_musculus 0 1628
ENSMUST00000178267 Rnf123-202 protein_coding Mus_musculus 0 1628
ENSMUST00000161673 Rnf123-007 retained_intron Mus_musculus 0 1628
ENSMUST00000162355 Rnf123-004 protein_coding Mus_musculus 0 1628
ENSMUST00000160249 Rnf123-001 protein_coding Mus_musculus 0 1628
ENSMUST00000160649 Rnf123-005 protein_coding Mus_musculus 0 1336
ENSMUST00000159136 Rnf123-008 retained_intron Mus_musculus 0 1282
ENSMUST00000159306 Rnf123-002 nonsense_mediated_decay Mus_musculus 0 1275
ENSMUST00000162753 Rnf123-013 nonsense_mediated_decay Mus_musculus 0 765
ENSMUST00000162123 Rnf123-014 retained_intron Mus_musculus 0 599
ENSDART00000044429 rnf123-201 protein_coding Danio_rerio 0 540
ENSDART00000148147 rnf123-001 protein_coding Danio_rerio 0 540
ENSMUST00000160841 Rnf123-009 retained_intron Mus_musculus 0 451
ENSMUST00000161828 Rnf123-012 protein_coding Mus_musculus 0 418
ENSMUST00000174504 Rnf123-016 protein_coding Mus_musculus 0 359
ENSMUST00000162516 Rnf123-011 protein_coding Mus_musculus 0 239
ENSMUST00000159372 Rnf123-003 protein_coding Mus_musculus 1e-34 154
ENSMUST00000112295 Gmppb-001 protein_coding Mus_musculus 4e-34 152
ENSMUST00000159523 Rnf123-006 retained_intron Mus_musculus 4e-34 152

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