C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-type lectin domain family 4, member n
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112554 Clec4n-004 ENSMUSG00000023349 10090 + 6:123229843-123247021 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000112554
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112554 0.136±0.09 0.049±0.00 0.429±0.07 0.035±0.00 0.526±0.07 0.583±0.18 0.198±0.00 0.181±0.07 1.314±0.73 1.769±0.59 0.245±0.22 0.279±0.15 0.094±0.01 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XR CIL_0003XR_000K CGP 6:123172893-123247021
CIL_0003XR CIL_0003XR_000D CGP 6:123229843-123275268

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016021 IEA integral component of membrane
GO:0030246 IDA carbohydrate binding
GO:0043123 IDA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045087 IDA innate immune response
GO:0050715 IDA positive regulation of cytokine secretion
GO:0050832 IDA defense response to fungus

Homologs

No Homologs available.

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