C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box and leucine-rich repeat protein 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112840 Fbxl17-002 ENSMUSG00000023965 10090 - 17:63057782-63492753 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverOvaryPlacentaTestisENSMUST00000112840
Transcript ID Bladder Brain Breast Heart Liver Ovary Placenta Testis
ENSMUST00000112840 2.072±0.00 4.970±0.00 2.733±0.00 1.041±0.00 0.322±0.00 2.734±0.37 1.419±0.00 0.341±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LC CIL_0008LC_0002 VISTA 17:62485705-63087128
CIL_0004Z5 CIL_0004Z5_0002 CGP 17:62604184-63500017
CIL_0007UW CIL_0007UW_0002 VISTA 17:62871422-63473537

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359660 FBXL17-001 protein_coding Homo_sapiens 0 1620
ENST00000481160 FBXL17-002 retained_intron Homo_sapiens 0 684
ENST00000496714 FBXL17-003 protein_coding Homo_sapiens 0 1378
ENST00000518486 FBXL17-004 retained_intron Homo_sapiens 0 407
ENST00000542267 FBXL17-201 protein_coding Homo_sapiens 0 1620
ENST00000619412 FBXL17-202 protein_coding Homo_sapiens 0 1620

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