C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008LC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1734 VISTA 9606 5:107273815-107875311
GeneTranscriptPositionBiotype
ENSG00000145743 (FBXL17)
F-box and leucine-rich repeat protein 17 		ENST00000359660 (FBXL17-001) 107859035-108381410 protein_coding
ENST00000481160 (FBXL17-002) 108020799-108364767 retained_intron
ENST00000496714 (FBXL17-003) 107878237-108367954 protein_coding
ENST00000518486 (FBXL17-004) 108364823-108380963 retained_intron
ENST00000542267 (FBXL17-201) 107859045-108382098 protein_coding
ENST00000619412 (FBXL17-202) 107859053-108381109 protein_coding
ENSG00000184349 (EFNA5)
ephrin-A5 		ENST00000333274 (EFNA5-001) 107376889-107670895 protein_coding
ENST00000504941 (EFNA5-002) 107426976-107670885 retained_intron
ENST00000505499 (EFNA5-005) 107427217-107506191 processed_transcript
ENST00000509503 (EFNA5-003) 107381238-107670627 protein_coding
ENST00000510359 (EFNA5-004) 107380984-107388553 processed_transcript
ENST00000611503 (EFNA5-201) 107376889-107427514 protein_coding
ENSG00000248827 (RP11-252I13.1)
 ENST00000505925 (RP11-252I13.1-001) 107724961-107727117 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008LC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1734 VISTA 10090 17:62485705-63087128
GeneTranscriptPositionBiotype
ENSMUSG00000023965 (Fbxl17)
F-box and leucine-rich repeat protein 17 		ENSMUST00000024761 (Fbxl17-001) 63057452-63500017 protein_coding
ENSMUST00000090318 (Fbxl17-004) 63384980-63481290 processed_transcript
ENSMUST00000112839 (Fbxl17-005) 63057782-63456166 processed_transcript
ENSMUST00000112840 (Fbxl17-002) 63057782-63492753 protein_coding
ENSMUST00000169134 (Fbxl17-003) 63058938-63451711 processed_transcript
ENSMUSG00000048915 (Efna5)
ephrin A5 		ENSMUST00000076840 (Efna5-001) 62604184-62881317 protein_coding
ENSMUST00000078839 (Efna5-002) 62607319-62881144 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008LC_0001ENSG00000145743ENST00000359660ENST00000481160ENST00000496714ENST00000518486ENST00000542267ENST00000619412ENSG00000184349ENST00000333274ENST00000504941ENST00000505499ENST00000509503ENST00000510359ENST00000611503ENSG00000248827ENST00000505925CIL_0008LC_0002ENSMUSG00000023965ENSMUST00000024761ENSMUST00000090318ENSMUST00000112839ENSMUST00000112840ENSMUST00000169134ENSMUSG00000048915ENSMUST00000076840ENSMUST00000078839
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008LC_0001ENSG00000145743ENST00000359660ENST00000481160ENST00000542267ENST00000619412ENSG00000184349ENST00000333274ENST00000504941ENST00000510359ENST00000611503ENSG00000248827ENST00000505925CIL_0008LC_0002ENSMUSG00000023965ENSMUST00000024761ENSMUST00000112840ENSMUST00000169134ENSMUSG00000048915ENSMUST00000076840ENSMUST00000078839
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145743 ENST00000359660 2.399±0.00 1.701±0.00 N/A 11.309±0.00 2.777±2.19 2.951±0.00 3.186±0.00 4.852±0.00 1.267±0.00 2.099±0.15 1.381±0.00 1.782±0.89 0.562±0.00 1.299±0.00
ENST00000481160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.579±0.00 3.918±3.22 N/A 6.372±0.00
ENST00000496714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542267 2.572±0.00 0.982±0.00 N/A 2.002±0.00 1.273±0.00 0.592±0.00 2.574±0.00 0.909±0.00 1.100±0.00 0.756±0.00 2.481±0.00 0.482±0.10 0.938±0.21 1.064±0.33
ENST00000619412 N/A 0.400±0.00 2.827±0.00 5.136±3.44 2.422±0.00 2.241±0.43 6.394±2.03 1.777±0.49 2.046±1.18 1.808±0.00 2.698±1.20 0.901±0.15 1.767±0.38 3.813±0.04
ENSG00000184349 ENST00000333274 0.430±0.00 0.263±0.00 N/A 1.228±0.27 2.105±1.21 0.539±0.07 N/A 1.984±0.00 0.141±0.00 0.224±0.00 N/A 1.094±0.63 2.622±0.00 0.847±0.18
ENST00000504941 N/A N/A 2.162±0.00 N/A 2.991±0.00 2.340±0.00 N/A N/A 0.982±0.00 0.750±0.00 N/A N/A N/A N/A
ENST00000505499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510359 N/A N/A N/A N/A N/A N/A N/A N/A 1.457±0.00 N/A N/A N/A N/A 1.190±0.00
ENST00000611503 N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A 0.563±0.00 0.024±0.00 0.801±0.00 0.957±0.00 0.156±0.00
ENSG00000248827 ENST00000505925 N/A 0.005±0.00 N/A N/A 0.026±0.00 0.005±0.00 N/A N/A 0.033±0.00 0.024±0.00 0.009±0.00 0.004±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023965 ENSMUST00000024761 1.730±0.15 5.210±1.47 1.716±0.00 2.280±0.75 7.150±2.41 5.749±0.52 1.982±0.19 3.140±1.71 2.219±1.11 6.605±0.80 N/A 11.440±5.05 1.075±0.48 1.275±0.50
ENSMUST00000090318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112840 N/A N/A 2.072±0.00 4.970±0.00 2.733±0.00 N/A 1.041±0.00 N/A 0.322±0.00 N/A N/A 2.734±0.37 1.419±0.00 0.341±0.00
ENSMUST00000169134 4.576±0.47 N/A 4.107±0.13 12.171±0.00 4.160±0.96 N/A 3.282±0.42 4.779±0.66 2.567±1.04 N/A N/A 5.342±2.35 2.064±0.72 1.721±0.73
ENSMUSG00000048915 ENSMUST00000076840 0.924±0.15 1.716±0.28 N/A 4.121±3.12 1.686±0.00 0.485±0.13 N/A 0.586±0.23 0.403±0.22 0.516±0.13 0.046±0.02 1.249±0.50 0.325±0.24 0.115±0.09
ENSMUST00000078839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A 0.556±0.00 0.552±0.28

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