C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1190002N15 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113028 1190002N15Rik-001 ENSMUSG00000045414 10090 - 9:94517864-94538081 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113028
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113028 9.070±1.62 18.002±2.88 10.004±0.71 8.864±3.38 11.410±5.44 11.991±1.19 6.879±0.36 2.882±0.45 7.453±1.24 46.778±5.32 1.272±0.32 34.535±14.11 4.969±3.27 0.897±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X5 CIL_0005X5_0002 CGP 9:92542223-94538081

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0003674 ND molecular_function
GO:0005615 ISS extracellular space
GO:0014066 ISS regulation of phosphatidylinositol 3-kinase signaling
GO:0030126 IEA COPI vesicle coat
GO:0030137 IDA COPI-coated vesicle
GO:0048199 IC vesicle targeting, to, from or within Golgi
GO:0060038 ISS cardiac muscle cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315691 C3orf58-001 protein_coding Homo_sapiens 0 2457
ENST00000441925 C3orf58-003 protein_coding Homo_sapiens 0 1421
ENST00000483808 C3orf58-005 retained_intron Homo_sapiens 0 652
ENST00000491798 C3orf58-004 processed_transcript Homo_sapiens 0 531
ENST00000492452 C3orf58-006 protein_coding Homo_sapiens 0 841
ENST00000493396 C3orf58-009 processed_transcript Homo_sapiens 0 553
ENST00000495414 C3orf58-002 protein_coding Homo_sapiens 0 1267

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