C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005X5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000011821-ENSDARG00000055629 CGP 7955 24:5317429-5797178
GeneTranscriptPositionBiotype
ENSDARG00000011821 (plod2)
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 		ENSDART00000005901 (plod2-001) 5317473-5394427 protein_coding
ENSDART00000106488 (plod2-002) 5317473-5394427 protein_coding
ENSDART00000128182 (plod2-003) 5317429-5347948 retained_intron
ENSDART00000140035 (plod2-004) 5317432-5342234 retained_intron
ENSDARG00000055629 (C24H3orf58 (2 of 2))
chromosome 3 open reading frame 58 		ENSDART00000078019 (C24H3orf58 (2 of 2)-201) 5736543-5775335 protein_coding
ENSDART00000137293 (C24H3orf58 (2 of 2)-001) 5736541-5797178 protein_coding
CIL_0005X5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032374-ENSMUSG00000045414 CGP 10090 9:92542223-94538081
GeneTranscriptPositionBiotype
ENSMUSG00000032374 (Plod2)
procollagen lysine, 2-oxoglutarate 5-dioxygenase 2 		ENSMUST00000070522 (Plod2-001) 92542223-92608428 protein_coding
ENSMUST00000160142 (Plod2-003) 92573588-92591684 retained_intron
ENSMUST00000160359 (Plod2-002) 92542264-92608420 protein_coding
ENSMUST00000161906 (Plod2-004) 92595345-92601066 retained_intron
ENSMUST00000190075 (Plod2-005) 92601342-92602617 retained_intron
ENSMUSG00000045414 (1190002N15Rik)
RIKEN cDNA 1190002N15 gene 		ENSMUST00000113028 (1190002N15Rik-001) 94517864-94538081 protein_coding
ENSMUSG00000098171 (Gm9621)
predicted gene 9621 		ENSMUST00000183322 (Gm9621-001) 93391368-93392370 processed_pseudogene
ENSMUSG00000099823 (RP24-331H14.3)
predicted gene 28054 		ENSMUST00000187280 (RP24-331H14.3-001) 92895832-92915791 lincRNA
ENSMUSG00000100294 (RP24-331H14.1)
RIKEN cDNA 1700034K08 gene 		ENSMUST00000185830 (RP24-331H14.1-004) 92979914-92990733 lincRNA
ENSMUST00000188082 (RP24-331H14.1-001) 92979914-93005733 lincRNA
ENSMUST00000188921 (RP24-331H14.1-003) 93001620-93005730 lincRNA
ENSMUST00000190562 (RP24-331H14.1-002) 92979995-93005739 lincRNA
ENSMUSG00000101309 (RP24-331H14.2)
predicted gene 29397 		ENSMUST00000185205 (RP24-331H14.2-001) 92976226-92976558 processed_pseudogene
ENSMUSG00000101357 (RP23-298I7.3)
predicted gene 2495 		ENSMUST00000191160 (RP23-298I7.3-001) 92612512-92612977 processed_pseudogene
ENSMUSG00000101734 (RP23-142I8.1)
RIKEN cDNA 4933400C23 gene 		ENSMUST00000188610 (RP23-142I8.1-001) 92718716-92795711 lincRNA
ENSMUST00000189773 (RP23-142I8.1-002) 92717456-92749216 lincRNA
ENSMUSG00000101949 (RP23-19M11.4)
predicted gene 5370 		ENSMUST00000187187 (RP23-19M11.4-001) 94407553-94408126 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005X5_0001ENSDARG00000011821ENSDART00000005901ENSDART00000106488ENSDART00000128182ENSDART00000140035ENSDARG00000055629ENSDART00000078019ENSDART00000137293CIL_0005X5_0002ENSMUSG00000032374ENSMUST00000070522ENSMUST00000160142ENSMUST00000160359ENSMUST00000161906ENSMUST00000190075ENSMUSG00000045414ENSMUST00000113028ENSMUSG00000098171ENSMUST00000183322ENSMUSG00000099823ENSMUST00000187280ENSMUSG00000100294ENSMUST00000185830ENSMUST00000188082ENSMUST00000188921ENSMUST00000190562ENSMUSG00000101309ENSMUST00000185205ENSMUSG00000101357ENSMUST00000191160ENSMUSG00000101734ENSMUST00000188610ENSMUST00000189773ENSMUSG00000101949ENSMUST00000187187
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005X5_0001ENSDARG00000011821ENSDART00000005901ENSDART00000106488ENSDARG00000055629ENSDART00000078019ENSDART00000137293CIL_0005X5_0002ENSMUSG00000032374ENSMUST00000070522ENSMUST00000160359ENSMUST00000190075ENSMUSG00000045414ENSMUST00000113028ENSMUSG00000098171ENSMUST00000183322ENSMUSG00000099823ENSMUST00000187280ENSMUSG00000100294ENSMUST00000185830ENSMUST00000188082ENSMUST00000188921ENSMUST00000190562ENSMUSG00000101309ENSMUST00000185205ENSMUSG00000101357ENSMUST00000191160ENSMUSG00000101734ENSMUST00000188610ENSMUST00000189773ENSMUSG00000101949ENSMUST00000187187
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000011821 ENSDART00000005901 N/A N/A N/A N/A N/A N/A 1.658±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000106488 N/A N/A N/A 0.399±0.17 N/A N/A N/A N/A 0.016±0.00 N/A 2.593±0.00 N/A N/A N/A
ENSDART00000128182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000055629 ENSDART00000078019 N/A N/A N/A N/A N/A N/A 1.499±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137293 N/A N/A N/A 4.573±2.57 N/A N/A 0.720±0.09 2.189±0.00 0.158±0.00 N/A 1.516±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032374 ENSMUST00000070522 1.483±1.02 16.238±4.65 N/A 2.202±1.24 3.024±1.14 1.374±0.54 0.917±0.19 6.250±0.67 0.776±0.69 2.292±0.65 0.128±0.04 27.623±15.11 8.654±2.78 1.297±0.56
ENSMUST00000160142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160359 8.794±7.16 62.420±12.51 13.154±2.40 0.982±0.51 1.496±0.32 3.720±0.69 3.632±0.73 1.329±0.28 0.552±0.42 9.028±0.55 0.337±0.16 39.142±26.20 8.049±5.83 0.667±0.37
ENSMUST00000161906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A N/A N/A
ENSMUSG00000045414 ENSMUST00000113028 9.070±1.62 18.002±2.88 10.004±0.71 8.864±3.38 11.410±5.44 11.991±1.19 6.879±0.36 2.882±0.45 7.453±1.24 46.778±5.32 1.272±0.32 34.535±14.11 4.969±3.27 0.897±0.17
ENSMUSG00000098171 ENSMUST00000183322 N/A N/A N/A 0.015±0.00 N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099823 ENSMUST00000187280 N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 0.040±0.00 0.017±0.00
ENSMUSG00000100294 ENSMUST00000185830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.14 0.050±0.04 N/A
ENSMUST00000188082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.126±0.00 2.461±0.87
ENSMUST00000188921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 12.410±0.00
ENSMUST00000190562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 3.920±0.48
ENSMUSG00000101309 ENSMUST00000185205 0.285±0.00 N/A 0.050±0.00 0.077±0.03 0.567±0.28 0.568±0.01 0.856±0.63 0.480±0.28 0.083±0.06 0.841±0.07 N/A N/A 0.031±0.00 0.484±0.00
ENSMUSG00000101357 ENSMUST00000191160 0.318±0.01 0.156±0.06 0.025±0.00 0.060±0.02 N/A 0.159±0.00 0.081±0.00 N/A N/A N/A N/A 0.413±0.30 0.045±0.00 0.314±0.08
ENSMUSG00000101734 ENSMUST00000188610 N/A N/A 0.009±0.00 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00
ENSMUST00000189773 N/A N/A 0.031±0.00 0.102±0.00 0.074±0.00 N/A N/A 0.193±0.00 N/A N/A N/A 0.094±0.07 N/A 0.262±0.15
ENSMUSG00000101949 ENSMUST00000187187 N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 0.020±0.00 N/A N/A N/A N/A 0.102±0.04

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