C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113067 Zcchc18-001 ENSMUSG00000031428 10090 + X:136993155-136996378 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113067
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113067 0.192±0.02 0.888±0.27 0.918±0.03 30.472±9.48 0.167±0.01 0.578±0.17 0.109±0.00 0.221±0.05 0.031±0.01 0.083±0.03 0.085±0.04 1.444±0.77 0.089±0.03 0.541±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000721 CIL_000721_0002 CGP X:136974022-137038302
CIL_00012D CIL_00012D_0002 CGP X:136981116-137038302
CIL_000531 CIL_000531_0002 CGP X:136993155-137082503

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding
GO:0016607 IBA nuclear speck
GO:0030374 IBA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030509 IBA BMP signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000537356 ZCCHC18-006 protein_coding Homo_sapiens 0 815
ENST00000611638 ZCCHC18-201 protein_coding Homo_sapiens 0 815

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