C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GEF with PH domain and SH3 binding motif 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113165 Ralgps1-004 ENSMUSG00000038831 10090 - 2:33133421-33371486 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyLiverLungOvaryPlacentaTestisENSMUST00000113165
Transcript ID Adipose Brain Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000113165 0.421±0.00 16.697±0.00 0.350±0.00 0.182±0.05 0.331±0.00 0.709±0.17 0.551±0.06 1.971±1.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_00075D CIL_00075D_0002 CGP 2:33133421-33371486

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000098840 ralgps1-001 protein_coding Danio_rerio 0 603
ENST00000259351 RALGPS1-001 protein_coding Homo_sapiens 0 2915
ENST00000319107 RALGPS1-009 protein_coding Homo_sapiens 0 464
ENST00000373434 RALGPS1-002 protein_coding Homo_sapiens 0 1480
ENST00000373436 RALGPS1-007 protein_coding Homo_sapiens 0 1314
ENST00000373439 RALGPS1-008 retained_intron Homo_sapiens 0 974
ENST00000394011 RALGPS1-012 protein_coding Homo_sapiens 0 353
ENST00000394022 RALGPS1-006 protein_coding Homo_sapiens 0 1314
ENST00000424082 RALGPS1-201 protein_coding Homo_sapiens 0 1482
ENST00000438723 RALGPS1-005 protein_coding Homo_sapiens 0 994
ENST00000471643 RALGPS1-004 processed_transcript Homo_sapiens 0 351
ENST00000472427 RALGPS1-010 processed_transcript Homo_sapiens 0 361
ENST00000477700 RALGPS1-011 processed_transcript Homo_sapiens 0 455
ENST00000480993 RALGPS1-013 processed_transcript Homo_sapiens 0 357

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