C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin-1 receptor-associated kinase 1 binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113245 Irak1bp1-001 ENSMUSG00000032251 10090 + 9:82829540-82847687 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113245
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113245 2.223±0.67 2.452±0.41 3.507±0.07 5.699±2.31 1.463±0.79 0.493±0.18 0.730±0.11 2.754±0.25 0.397±0.19 0.792±0.09 0.845±0.13 2.370±0.63 0.746±0.59 8.063±2.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GD CIL_0006GD_0002 CGP 9:81863670-82847687
CIL_0006GA CIL_0006GA_0002 CGP 9:82829540-82975516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007249 IDA I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369940 IRAK1BP1-001 protein_coding Homo_sapiens 0 793
ENST00000606868 IRAK1BP1-004 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000607739 IRAK1BP1-003 protein_coding Homo_sapiens 0 564

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