C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin-1 receptor-associated kinase 1 binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369940 IRAK1BP1-001 ENSG00000146243 9606 + 6:78867472-78903102 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryPlacentaTestisENST00000369940
Transcript ID Kidney Ovary Placenta Testis
ENST00000369940 0.844±0.00 1.086±0.16 0.258±0.04 1.192±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GD CIL_0006GD_0001 CGP 6:77690658-78946440
CIL_0006GA CIL_0006GA_0001 CGP 6:78867472-79078236

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007249 ISS I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113245 Irak1bp1-001 protein_coding Mus_musculus 0 793
ENSMUST00000034783 Irak1bp1-002 protein_coding Mus_musculus 0 551
ENSMUST00000189018 Ccdc86-003 retained_intron Mus_musculus 0.00000001 68
ENSMUST00000057256 6030458C11Rik-201 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000169308 0610011F06Rik-006 protein_coding Mus_musculus 0.0000002 64
ENSMUST00000110456 0610011F06Rik-005 nonsense_mediated_decay Mus_musculus 0.0000002 64

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