C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Tp53rk binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113753 Tprkb-001 ENSMUSG00000054226 10090 + 6:85915738-85930284 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113753
Transcript ID Adipose Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113753 1.190±0.19 1.369±0.32 0.934±0.38 8.809±1.82 6.137±2.73 1.058±0.18 1.642±0.00 1.936±0.54 1.733±0.67 1.122±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003O2 CIL_0003O2_0002 CGP 6:85910154-85930284

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0008033 IEA tRNA processing
GO:0008150 ND biological_process
GO:0019901 ISA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272424 TPRKB-001 protein_coding Homo_sapiens 0 580
ENST00000318190 TPRKB-005 protein_coding Homo_sapiens 0 416
ENST00000409716 TPRKB-004 protein_coding Homo_sapiens 0 416
ENST00000462166 TPRKB-007 processed_transcript Homo_sapiens 0 300
ENST00000463231 TPRKB-008 processed_transcript Homo_sapiens 0 303
ENST00000465517 SLC2A13-003 retained_intron Homo_sapiens 0.00007 53
ENST00000470012 TPRKB-006 retained_intron Homo_sapiens 2.00386e-43 180
ENST00000484969 TPRKB-009 processed_transcript Homo_sapiens 0 468
ENST00000485758 TPRKB-011 processed_transcript Homo_sapiens 0 237
ENST00000489476 TPRKB-010 processed_transcript Homo_sapiens 0 305
ENST00000497464 TPRKB-002 retained_intron Homo_sapiens 0 468

Loading