C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113896 Apoo-001 ENSMUSG00000079508 10090 + X:94367165-94417093 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113896
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113896 1.738±0.83 5.849±1.70 1.749±0.24 3.589±0.86 1.744±1.11 12.083±1.45 5.727±1.69 1.556±0.51 1.969±0.43 26.664±2.41 1.888±0.57 3.256±0.57 0.538±0.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379226 APOO-002 protein_coding Homo_sapiens 0 861
ENST00000439528 APOO-001 protein_coding Homo_sapiens 0 614
ENST00000476598 APOO-004 processed_transcript Homo_sapiens 5e-20 100
ENST00000490078 APOO-003 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000513530 APOOP4-001 processed_pseudogene Homo_sapiens 0 529
ENST00000564761 APOOP5-001 transcribed_processed_pseudogene Homo_sapiens 0 366

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