C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000113898 Apoo-004 ENSMUSG00000079508 10090 + X:94367117-94416961 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000113898
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000113898 3.460±0.98 1.709±0.00 4.316±2.20 8.322±3.24 3.233±0.49 1.870±0.61 18.633±1.84 12.278±1.87 5.224±2.10 1.025±0.55 64.266±6.85 5.774±7.86 15.518±9.68 2.916±0.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379226 APOO-002 protein_coding Homo_sapiens 0 863
ENST00000439528 APOO-001 protein_coding Homo_sapiens 0 614
ENST00000476598 APOO-004 processed_transcript Homo_sapiens 5e-20 100
ENST00000490078 APOO-003 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000513530 APOOP4-001 processed_pseudogene Homo_sapiens 0 544
ENST00000564761 APOOP5-001 transcribed_processed_pseudogene Homo_sapiens 0 381

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