C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114357 St3gal6-002 ENSMUSG00000022747 10090 - 16:58470212-58524185 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverMuscleOvaryPlacentaENSMUST00000114357
Transcript ID Breast Colon Kidney Liver Muscle Ovary Placenta
ENSMUST00000114357 7.290±0.62 17.542±2.78 4.308±0.22 2.762±1.75 16.500±4.05 4.772±0.16 12.572±6.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0006464 ISS cellular protein modification process
GO:0006486 IEA protein glycosylation
GO:0006664 ISS glycolipid metabolic process
GO:0008373 ISO sialyltransferase activity
GO:0009311 ISS oligosaccharide metabolic process
GO:0030173 IEA integral component of Golgi membrane
GO:0052798 ISS beta-galactoside alpha-2,3-sialyltransferase activity
GO:0071354 ISS cellular response to interleukin-6
GO:0097503 ISO:IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265261 ST3GAL6-201 protein_coding Homo_sapiens 0 207
ENST00000394162 ST3GAL6-202 protein_coding Homo_sapiens 0 972
ENST00000460774 ST3GAL6-008 protein_coding Homo_sapiens 0 207
ENST00000462152 ST3GAL6-003 processed_transcript Homo_sapiens 0 771
ENST00000466482 ST3GAL6-009 processed_transcript Homo_sapiens 0 196
ENST00000468553 ST3GAL6-013 protein_coding Homo_sapiens 0 215
ENST00000469105 ST3GAL6-002 nonsense_mediated_decay Homo_sapiens 0 859
ENST00000474595 ST3GAL6-022 processed_transcript Homo_sapiens 0.000000000007 75
ENST00000476833 ST3GAL6-014 nonsense_mediated_decay Homo_sapiens 5e-20 102
ENST00000477574 ST3GAL6-020 protein_coding Homo_sapiens 0 291
ENST00000477899 ST3GAL6-023 processed_transcript Homo_sapiens 0 575
ENST00000483910 ST3GAL6-001 protein_coding Homo_sapiens 0 972
ENST00000485145 ST3GAL6-021 protein_coding Homo_sapiens 0 470
ENST00000485391 ST3GAL6-016 protein_coding Homo_sapiens 0 215
ENST00000486249 ST3GAL6-004 nonsense_mediated_decay Homo_sapiens 2e-19 102
ENST00000486334 ST3GAL6-010 protein_coding Homo_sapiens 0 569
ENST00000489112 ST3GAL6-007 retained_intron Homo_sapiens 0 211
ENST00000492254 ST3GAL6-018 protein_coding Homo_sapiens 0 577
ENST00000493953 ST3GAL6-024 processed_transcript Homo_sapiens 0 575
ENST00000495376 ST3GAL6-017 nonsense_mediated_decay Homo_sapiens 4e-20 102
ENST00000497008 ST3GAL6-019 protein_coding Homo_sapiens 0 215
ENST00000497621 ST3GAL6-005 nonsense_mediated_decay Homo_sapiens 0 972
ENST00000613264 ST3GAL6-203 protein_coding Homo_sapiens 0 972

Loading