C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Eph receptor B6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114732 Ephb6-001 ENSMUSG00000029869 10090 + 6:41605482-41620509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114732
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114732 4.518±0.52 8.303±0.81 4.244±0.33 18.185±3.34 6.101±0.73 2.442±0.27 0.457±0.10 1.069±0.25 0.286±0.11 4.274±0.22 0.230±0.08 12.113±3.19 0.610±0.34 0.554±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039U CIL_00039U_0002 CGP 6:41521787-41620509
CIL_00039T CIL_00039T_0002 CGP 6:41605482-41636405

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005003 IEA ephrin receptor activity
GO:0005524 IEA ATP binding
GO:0005576 IEA extracellular region
GO:0005887 IEA integral component of plasma membrane
GO:0006468 IEA protein phosphorylation
GO:0035898 IMP parathyroid hormone secretion
GO:0048013 IEA ephrin receptor signaling pathway
GO:0055074 IMP calcium ion homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000411471 EPHB6-201 protein_coding Homo_sapiens 0 3232
ENST00000422643 EPHB6-202 protein_coding Homo_sapiens 0 3411
ENST00000471581 EPHB6-007 retained_intron Homo_sapiens 0 580
ENST00000476059 EPHB6-006 protein_coding Homo_sapiens 0 292
ENST00000486511 EPHB6-005 retained_intron Homo_sapiens 0 1367
ENST00000611578 EPHB6-004 nonsense_mediated_decay Homo_sapiens 0 1749
ENST00000614832 EPHB6-003 nonsense_mediated_decay Homo_sapiens 0 3232
ENST00000615824 EPHB6-201 protein_coding Homo_sapiens 0 3216
ENST00000616380 EPHB6-002 retained_intron Homo_sapiens 0 1940
ENST00000617632 EPHB6-008 processed_transcript Homo_sapiens 0 350
ENST00000618483 EPHB6-202 protein_coding Homo_sapiens 0 3398
ENST00000619012 EPHB6-001 protein_coding Homo_sapiens 0 3413

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