C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00039U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204983-ENSG00000106123 CGP 9606 7:142749468-142871094
GeneTranscriptPositionBiotype
ENSG00000106123 (EPHB6)
EPH receptor B6 		ENST00000411471 (EPHB6-201) 142862756-142871092 protein_coding
ENST00000422643 (EPHB6-202) 142862756-142871092 protein_coding
ENST00000471581 (EPHB6-007) 142869772-142870615 retained_intron
ENST00000476059 (EPHB6-006) 142869931-142871093 protein_coding
ENST00000486511 (EPHB6-005) 142867282-142871094 retained_intron
ENST00000497095 (EPHB6-009) 142855104-142862788 processed_transcript
ENST00000611578 (EPHB6-004) 142862035-142871087 nonsense_mediated_decay
ENST00000614832 (EPHB6-003) 142855143-142871087 nonsense_mediated_decay
ENST00000616380 (EPHB6-002) 142855124-142871094 retained_intron
ENST00000617632 (EPHB6-008) 142869898-142871092 processed_transcript
ENST00000619012 (EPHB6-001) 142855061-142871094 protein_coding
ENSG00000204983 (PRSS1)
protease, serine, 1 (trypsin 1) 		ENST00000311737 (PRSS1-001) 142749479-142753070 protein_coding
ENST00000463701 (PRSS1-005) 142751110-142753072 retained_intron
ENST00000485223 (PRSS1-002) 142749472-142752008 retained_intron
ENST00000486171 (PRSS1-003) 142749468-142753020 protein_coding
ENST00000492062 (PRSS1-004) 142750665-142753069 protein_coding
ENST00000497041 (PRSS1-007) 142749481-142751091 retained_intron
ENST00000612126 (PRSS1-201) 142749479-142763997 protein_coding
ENST00000619214 (PRSS1-202) 142749468-142753076 protein_coding
ENSG00000211765 (TRBJ2-2)
T cell receptor beta joining 2-2 		ENST00000390413 (TRBJ2-2-001) 142796560-142796610 TR_J_gene
ENSG00000211767 (TRBJ2-3)
T cell receptor beta joining 2-3 		ENST00000390415 (TRBJ2-3-001) 142796847-142796895 TR_J_gene
ENSG00000211768 (TRBJ2-4)
T cell receptor beta joining 2-4 		ENST00000390416 (TRBJ2-4-001) 142796998-142797047 TR_J_gene
ENSG00000211771 (TRBJ2-7)
T cell receptor beta joining 2-7 		ENST00000390419 (TRBJ2-7-001) 142797456-142797502 TR_J_gene
ENSG00000211772 (TRBC2)
T cell receptor beta constant 2 		ENST00000466254 (TRBC2-001) 142801041-142802748 TR_C_gene
ENST00000610566 (TRBC2-201) 142670777-142802529 TR_C_gene
ENST00000610847 (TRBC2-202) 142670777-142802529 TR_C_gene
ENST00000613761 (TRBC2-203) 142715389-142802529 TR_C_gene
ENST00000616837 (TRBC2-204) 142670777-142802529 TR_C_gene
ENSG00000237254 (TRBV30)
T cell receptor beta variable 30 (gene/pseudogene) 		ENST00000417977 (TRBV30-001) 142812586-142813399 TR_V_gene
ENSG00000243661 (WBP1LP1)
WW domain binding protein 1-like pseudogene 1 		ENST00000460451 (WBP1LP1-001) 142778642-142779537 processed_pseudogene
ENSG00000275896 (PRSS3P2)
protease, serine, 3 pseudogene 2 		ENST00000539842 (PRSS3P2-001) 142770983-142774508 protein_coding
ENST00000610835 (PRSS3P2-003) 142770970-142772552 retained_intron
ENST00000618750 (PRSS3P2-002) 142772159-142774557 processed_transcript
ENST00000623404 (PRSS3P2-201) 142770967-142774558 protein_coding
ENST00000623413 (PRSS3P2-202) 142749479-142774558 protein_coding
ENST00000624178 (PRSS3P2-203) 142748662-142774560 protein_coding
ENST00000624448 (PRSS3P2-204) 142770967-142774558 protein_coding
ENST00000625050 (PRSS3P2-205) 142760398-142774564 protein_coding
CIL_00039U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057163-ENSMUSG00000029869 CGP 10090 6:41521787-41620509
GeneTranscriptPositionBiotype
ENSMUSG00000029869 (Ephb6)
Eph receptor B6 		ENSMUST00000114732 (Ephb6-001) 41605482-41620509 protein_coding
ENSMUST00000167082 (Ephb6-003) 41614692-41616757 nonsense_mediated_decay
ENSMUST00000167497 (Ephb6-004) 41619943-41620507 protein_coding
ENSMUST00000170624 (Ephb6-002) 41613298-41614611 processed_transcript
ENSMUSG00000057163 (Prss2)
protease, serine 2 		ENSMUST00000070380 (Prss2-001) 41521787-41525079 protein_coding
ENSMUSG00000076490 (Trbc1)
T cell receptor beta, constant region 1 		ENSMUST00000103291 (Trbc1-201) 41538218-41539347 IG_C_gene
ENSMUSG00000076498 (Trbc2)
T cell receptor beta, constant 2 		ENSMUST00000103299 (Trbc2-201) 41546730-41548181 IG_C_gene
ENSMUSG00000076499 (Trbv31)
T cell receptor beta, variable 31 		ENSMUST00000103300 (Trbv31-201) 41557691-41558371 IG_LV_gene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039U_0001ENSG00000106123ENST00000411471ENST00000422643ENST00000471581ENST00000476059ENST00000486511ENST00000497095ENST00000611578ENST00000614832ENST00000616380ENST00000617632ENST00000619012ENSG00000204983ENST00000311737ENST00000463701ENST00000485223ENST00000486171ENST00000492062ENST00000497041ENST00000612126ENST00000619214ENSG00000211765ENST00000390413ENSG00000211767ENST00000390415ENSG00000211768ENST00000390416ENSG00000211771ENST00000390419ENSG00000211772ENST00000466254ENST00000610566ENST00000610847ENST00000613761ENST00000616837ENSG00000237254ENST00000417977ENSG00000243661ENST00000460451ENSG00000275896ENST00000539842ENST00000610835ENST00000618750ENST00000623404ENST00000623413ENST00000624178ENST00000624448ENST00000625050CIL_00039U_0002ENSMUSG00000029869ENSMUST00000114732ENSMUST00000167082ENSMUST00000167497ENSMUST00000170624ENSMUSG00000057163ENSMUST00000070380ENSMUSG00000076490ENSMUST00000103291ENSMUSG00000076498ENSMUST00000103299ENSMUSG00000076499ENSMUST00000103300
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00039U_0001ENSG00000106123ENST00000411471ENST00000422643ENST00000471581ENST00000476059ENST00000497095ENST00000611578ENST00000614832ENST00000617632ENST00000619012ENSG00000204983ENST00000311737ENST00000463701ENST00000485223ENST00000486171ENST00000492062ENST00000497041ENST00000619214ENSG00000211765ENST00000390413ENSG00000211767ENST00000390415ENSG00000211768ENST00000390416ENSG00000211771ENST00000390419ENSG00000211772ENST00000466254ENST00000610566ENST00000613761ENST00000616837ENSG00000237254ENST00000417977ENSG00000243661ENST00000460451ENSG00000275896ENST00000539842ENST00000618750ENST00000623413ENST00000625050CIL_00039U_0002ENSMUSG00000029869ENSMUST00000114732ENSMUST00000167082ENSMUST00000167497ENSMUST00000170624ENSMUSG00000057163ENSMUST00000070380ENSMUSG00000076490ENSMUST00000103291ENSMUSG00000076498ENSMUST00000103299ENSMUSG00000076499ENSMUST00000103300
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106123 ENST00000411471 0.533±0.00 N/A N/A N/A N/A 0.515±0.00 0.066±0.00 0.022±0.00 0.417±0.00 N/A N/A N/A 0.440±0.00 N/A
ENST00000422643 N/A 3.610±0.00 N/A 5.973±3.71 0.710±0.52 0.624±0.26 0.199±0.00 1.473±0.00 N/A 2.134±0.00 N/A 4.912±1.27 0.644±0.00 2.761±0.00
ENST00000471581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.909±0.00 N/A N/A N/A
ENST00000476059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.528±0.00 N/A N/A N/A
ENST00000486511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A N/A
ENST00000611578 N/A N/A N/A N/A N/A 0.449±0.00 N/A N/A N/A N/A 0.165±0.08 N/A N/A 1.844±0.00
ENST00000614832 0.396±0.00 N/A N/A N/A N/A 0.990±0.00 N/A N/A 0.361±0.00 2.033±0.00 N/A 1.371±0.70 0.570±0.37 2.717±0.00
ENST00000616380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.186±0.00 N/A
ENST00000619012 0.550±0.00 1.032±0.00 N/A N/A 1.161±0.00 N/A N/A 1.580±0.00 N/A N/A N/A 0.993±0.80 N/A 1.604±0.00
ENSG00000204983 ENST00000311737 N/A N/A N/A N/A 6.538±0.00 N/A N/A N/A N/A N/A N/A 2.071±0.00 N/A N/A
ENST00000463701 N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485223 N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00
ENST00000492062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.216±0.00 N/A N/A
ENST00000497041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00
ENST00000612126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619214 N/A N/A N/A N/A N/A N/A N/A 0.176±0.00 N/A N/A N/A N/A N/A 0.014±0.00
ENSG00000211765 ENST00000390413 N/A 5.764±0.00 N/A N/A N/A N/A N/A N/A 1.331±0.00 N/A N/A N/A N/A 1.313±0.00
ENSG00000211767 ENST00000390415 N/A 17.715±0.00 N/A N/A 8.790±0.00 11.394±0.00 N/A N/A N/A N/A N/A N/A N/A 1.588±0.00
ENSG00000211768 ENST00000390416 N/A 8.072±0.00 N/A N/A N/A 1.476±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000211771 ENST00000390419 N/A 15.426±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000211772 ENST00000466254 N/A 146.083±0.00 2.308±0.00 6.608±1.60 N/A 4.065±0.00 0.769±0.49 0.693±0.00 2.363±0.00 22.288±19.05 2.683±2.43 7.488±3.80 5.731±3.02 5.381±1.38
ENST00000610566 10.429±0.00 28.692±0.00 N/A 4.781±0.00 11.907±0.00 N/A 0.114±0.00 15.111±0.00 N/A N/A N/A N/A N/A 10.580±0.00
ENST00000610847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613761 2.916±0.00 N/A N/A N/A 4.279±0.00 4.859±0.00 N/A 5.286±0.00 0.525±0.00 N/A N/A N/A N/A N/A
ENST00000616837 3.473±0.00 N/A N/A 2.017±0.00 4.392±0.00 5.194±0.00 N/A 5.265±0.00 N/A N/A N/A N/A N/A 4.823±0.00
ENSG00000237254 ENST00000417977 N/A 2.372±0.00 N/A N/A N/A N/A 0.049±0.00 N/A N/A 1.799±0.00 N/A 0.503±0.00 0.192±0.00 N/A
ENSG00000243661 ENST00000460451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.326±0.00
ENSG00000275896 ENST00000539842 N/A N/A N/A N/A 2.873±0.00 0.420±0.00 N/A N/A N/A N/A N/A 9.300±5.93 N/A N/A
ENST00000610835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618750 0.099±0.00 N/A 0.607±0.00 0.123±0.00 N/A N/A N/A N/A N/A 0.289±0.00 N/A 4.612±0.00 0.124±0.00 0.033±0.00
ENST00000623404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000623413 N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00
ENST00000624178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000625050 N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.147±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029869 ENSMUST00000114732 4.518±0.52 8.303±0.81 4.244±0.33 18.185±3.34 6.101±0.73 2.442±0.27 0.457±0.10 1.069±0.25 0.286±0.11 4.274±0.22 0.230±0.08 12.113±3.19 0.610±0.34 0.554±0.33
ENSMUST00000167082 N/A N/A N/A N/A N/A N/A 0.569±0.00 N/A N/A N/A 0.258±0.00 N/A N/A N/A
ENSMUST00000167497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.417±0.15 N/A N/A N/A
ENSMUST00000170624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A
ENSMUSG00000057163 ENSMUST00000070380 0.311±0.17 0.133±0.05 0.229±0.17 0.044±0.02 0.538±0.40 1139.882±1138.22 0.119±0.10 N/A 0.632±0.83 4.788±4.62 0.119±0.06 1.618±1.08 0.131±0.08 0.848±0.33
ENSMUSG00000076490 ENSMUST00000103291 1.488±0.84 0.636±0.34 N/A 0.091±0.07 44.858±19.37 3.277±0.56 0.674±0.41 2.375±1.86 0.677±0.37 4.036±0.90 0.151±0.02 0.739±0.49 0.420±0.20 0.086±0.01
ENSMUSG00000076498 ENSMUST00000103299 1.224±0.52 0.842±0.53 1.338±0.29 N/A 58.895±14.14 1.832±0.53 0.980±0.44 2.224±1.99 0.824±0.46 3.285±1.26 0.250±0.09 1.065±0.46 0.331±0.23 0.857±0.54
ENSMUSG00000076499 ENSMUST00000103300 0.406±0.16 N/A 0.103±0.05 N/A 15.631±4.08 1.009±0.43 0.522±0.13 2.791±0.90 0.128±0.09 1.607±0.57 0.295±0.16 0.793±0.00 0.030±0.00 N/A

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