C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat and SAM domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114842 Anks1-001 ENSMUSG00000024219 10090 + 17:27909340-28062600 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000114842
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000114842 3.089±0.79 2.815±0.36 2.472±0.00 4.036±0.98 2.399±0.31 1.234±0.27 4.158±0.77 4.672±1.30 4.613±1.84 1.680±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EV CIL_0002EV_0002 CGP 17:27901122-28062600
CIL_0002EU CIL_0002EU_0002 CGP 17:27909340-28080639

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006929 IDA substrate-dependent cell migration
GO:0016322 IMP neuron remodeling
GO:0043005 IDA neuron projection
GO:0046875 IPI ephrin receptor binding
GO:0048013 IMP ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143125 anks1aa-002 protein_coding Danio_rerio 0 206
ENST00000360359 ANKS1A-001 protein_coding Homo_sapiens 0 3138
ENST00000470698 ANKS1A-002 processed_transcript Homo_sapiens 0 623

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