C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E74-like factor 4 (ets domain transcription factor)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114958 Elf4-001 ENSMUSG00000031103 10090 - X:48411046-48454169 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114958
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114958 3.172±1.54 6.927±1.25 3.090±0.21 0.380±0.05 12.815±8.31 16.513±6.38 0.684±0.21 1.057±0.30 1.246±1.05 6.634±1.45 0.317±0.00 8.433±3.48 1.289±0.56 0.549±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AD CIL_0000AD_0002 CGP X:48341358-48463132
CIL_0000SZ CIL_0000SZ_0002 CGP X:48411046-48513563

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001787 IDA natural killer cell proliferation
GO:0001866 IDA NK T cell proliferation
GO:0005515 IEA protein binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0016605 ISS PML body
GO:0030154 IBA cell differentiation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308167 ELF4-001 protein_coding Homo_sapiens 0 1916
ENST00000335997 ELF4-002 protein_coding Homo_sapiens 0 1958
ENST00000615377 ELF4-201 protein_coding Homo_sapiens 0 1906

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