C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E74-like factor 4 (ets domain transcription factor)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000335997 ELF4-002 ENSG00000102034 9606 - X:130064874-130110716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLungPlacentaTestisENST00000335997
Transcript ID Breast Colon Heart Lung Placenta Testis
ENST00000335997 1.689±0.00 0.944±0.08 0.858±0.00 1.261±0.00 3.392±0.49 0.448±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000AD CIL_0000AD_0001 CGP X:129981107-130110716
CIL_0000SZ CIL_0000SZ_0001 CGP X:130064874-130165887

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001787 ISS natural killer cell proliferation
GO:0001866 ISS NK T cell proliferation
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0016605 IDA PML body
GO:0030154 IBA cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114958 Elf4-001 protein_coding Mus_musculus 0 1958
ENSMUST00000033429 Elf4-201 protein_coding Mus_musculus 0 1916
ENSMUST00000140486 Elf4-002 protein_coding Mus_musculus 0 989

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