C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oculocerebrorenal syndrome of Lowe
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115013 Ocrl-005 ENSMUSG00000001173 10090 + X:47960289-47965763 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115013
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115013 7.587±2.07 12.545±3.13 7.426±1.55 7.564±1.98 6.108±2.22 5.320±1.13 3.164±0.35 3.194±0.64 1.743±0.69 5.000±2.64 1.903±0.50 9.689±3.04 1.832±0.72 1.618±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000A1 CIL_0000A1_0002 CGP X:47809368-47965868

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IGI in utero embryonic development
GO:0004439 IDA phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0005794 ISS Golgi apparatus
GO:0007165 IEA signal transduction
GO:0046856 IDA phosphatidylinositol dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357121 OCRL-002 protein_coding Homo_sapiens 0 1242
ENST00000371113 OCRL-001 protein_coding Homo_sapiens 0 1243
ENST00000463271 OCRL-005 processed_transcript Homo_sapiens 0 545

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