C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spire homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115050 Spire1-203 ENSMUSG00000024533 10090 - 18:67488209-67549173 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115050
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115050 1.230±0.28 0.777±0.33 1.765±0.00 4.597±2.69 1.120±0.56 0.468±0.05 0.159±0.03 1.094±0.00 2.746±3.02 2.023±0.00 0.204±0.00 1.224±0.78 1.054±0.00 2.048±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZP CIL_0007ZP_0002 VISTA 18:67068230-67671525
CIL_00010Z CIL_00010Z_0002 CGP 18:67464849-67552777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005794 IDA Golgi apparatus
GO:0048193 IDA Golgi vesicle transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309836 SPIRE1-005 protein_coding Homo_sapiens 0 1947
ENST00000409402 SPIRE1-001 protein_coding Homo_sapiens 0 1240
ENST00000410092 SPIRE1-002 protein_coding Homo_sapiens 0 1969
ENST00000440472 SPIRE1-003 nonsense_mediated_decay Homo_sapiens 0 1820
ENST00000449797 SPIRE1-006 protein_coding Homo_sapiens 0 420
ENST00000453447 SPIRE1-010 protein_coding Homo_sapiens 0 1947
ENST00000462226 SPIRE1-004 protein_coding Homo_sapiens 1e-34 150
ENST00000464481 SPIRE1-008 processed_transcript Homo_sapiens 0 763
ENST00000487491 SPIRE1-007 processed_transcript Homo_sapiens 0 499
ENST00000497844 SPIRE1-011 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000498803 SPIRE1-009 retained_intron Homo_sapiens 0 520
ENST00000588236 SPIRE1-013 retained_intron Homo_sapiens 0 580
ENST00000592156 SPIRE1-012 nonsense_mediated_decay Homo_sapiens 0 760

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