C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: etoposide induced 2.4 mRNA
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115086 Ei24-001 ENSMUSG00000062762 10090 - 9:36779159-36797356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115086
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115086 41.586±3.69 16.164±6.08 56.336±5.20 25.178±10.42 23.895±10.44 18.285±6.60 26.752±7.40 38.806±9.40 51.433±35.53 26.433±2.65 34.505±3.60 17.448±5.10 14.354±6.14 9.192±4.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000559 CIL_000559_0002 CGP 9:36729344-36797361
CIL_00080D CIL_00080D_0002 VISTA 9:36753339-37355278

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0006914 IMP autophagy
GO:0008630 IDA intrinsic apoptotic signaling pathway in response to DNA damage
GO:0016021 IEA integral component of membrane
GO:0030308 ISS negative regulation of cell growth
GO:0042493 IMP response to drug
GO:0050885 IMP neuromuscular process controlling balance
GO:2001244 IMP positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278903 EI24-002 protein_coding Homo_sapiens 0 1592
ENST00000397776 EI24P2-001 processed_pseudogene Homo_sapiens 0 1288
ENST00000416584 EI24P1-001 processed_pseudogene Homo_sapiens 0 289
ENST00000524723 EI24-011 protein_coding Homo_sapiens 0 505
ENST00000527131 EI24-008 protein_coding Homo_sapiens 0 584
ENST00000527235 EI24-018 protein_coding Homo_sapiens 0 1026
ENST00000527520 EI24-013 protein_coding Homo_sapiens 0 342
ENST00000527842 EI24-009 protein_coding Homo_sapiens 0 861
ENST00000529765 EI24-014 retained_intron Homo_sapiens 0 512
ENST00000529812 EI24-007 protein_coding Homo_sapiens 1e-19 100
ENST00000530540 EI24-017 retained_intron Homo_sapiens 0 246
ENST00000531636 EI24-005 nonsense_mediated_decay Homo_sapiens 0 1040
ENST00000534546 EI24-006 protein_coding Homo_sapiens 0 1423
ENST00000615917 EI24-003 protein_coding Homo_sapiens 0 1280
ENST00000618552 EI24-004 protein_coding Homo_sapiens 0 1543
ENST00000620753 EI24-001 protein_coding Homo_sapiens 0 1585

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