C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: etoposide induced 2.4 mRNA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062762 Ei24 10090 - 9:36779159-36797361 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000115086 Ei24-001 36779159-36797356 protein_coding
  ENSMUST00000163192 Ei24-002 36779159-36797273 protein_coding
  ENSMUST00000183360 Ei24-006 36786523-36797361 nonsense_mediated_decay
  ENSMUST00000183422 Ei24-009 36780177-36782719 retained_intron
  ENSMUST00000183430 Ei24-008 36782783-36786013 retained_intron
  ENSMUST00000184235 Ei24-004 36785614-36790270 protein_coding
  ENSMUST00000184395 Ei24-003 36785605-36797020 protein_coding
  ENSMUST00000185124 Ei24-007 36779878-36783201 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115086ENSMUST00000163192ENSMUST00000183360ENSMUST00000184235ENSMUST00000184395
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115086 41.586±3.69 16.164±6.08 56.336±5.20 25.178±10.42 23.895±10.44 18.285±6.60 26.752±7.40 38.806±9.40 51.433±35.53 26.433±2.65 34.505±3.60 17.448±5.10 14.354±6.14 9.192±4.16
ENSMUST00000163192 N/A 9.829±3.52 N/A 6.226±0.00 N/A 4.222±0.55 N/A N/A 2.548±0.49 5.420±0.36 5.149±0.23 4.922±1.40 3.171±0.00 N/A
ENSMUST00000183360 71.308±0.00 85.045±21.28 N/A N/A 27.577±5.26 36.987±8.59 N/A 39.918±0.00 54.491±0.54 35.796±7.61 N/A 23.938±5.44 N/A N/A
ENSMUST00000184235 N/A N/A N/A 31.826±0.00 N/A N/A N/A N/A N/A N/A N/A 33.063±0.00 30.161±0.00 N/A
ENSMUST00000184395 N/A N/A N/A 52.064±0.00 N/A N/A N/A N/A N/A N/A N/A 74.188±0.00 71.892±8.05 12.573±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000559 CIL_000559_0002 CGP 9:36729344-36797361
CIL_00080D CIL_00080D_0002 VISTA 9:36753339-37355278

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0006914 IMP autophagy
GO:0008630 IDA intrinsic apoptotic signaling pathway in response to DNA damage
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030308 ISS negative regulation of cell growth
GO:0042493 IMP response to drug
GO:0050885 IMP neuromuscular process controlling balance
GO:2001244 IMP positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053840 ei24 etoposide induced 2.4 protein_coding Danio_rerio
ENSG00000149547 EI24 etoposide induced 2.4 protein_coding Homo_sapiens

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