C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 136
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115275 Ccdc136-001 ENSMUSG00000029769 10090 + 6:29396630-29426953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000115275
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000115275 2.100±1.85 0.273±0.01 5.060±1.70 0.482±0.22 0.748±0.42 0.204±0.00 0.492±0.23 0.079±0.01 0.390±0.11 0.895±0.19 1.592±0.59 0.250±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YA CIL_0001YA_0002 CGP 6:29376671-29426994
CIL_0005UF CIL_0005UF_0004 CGP 6:29396309-29461888

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297788 CCDC136-001 protein_coding Homo_sapiens 0 2248
ENST00000378685 CCDC136-002 protein_coding Homo_sapiens 0 944
ENST00000460941 CCDC136-013 retained_intron Homo_sapiens 0 287
ENST00000464672 CCDC136-007 protein_coding Homo_sapiens 0 1269
ENST00000464832 CCDC136-003 protein_coding Homo_sapiens 0 1314
ENST00000480137 CCDC136-004 retained_intron Homo_sapiens 0 817
ENST00000485832 CCDC136-012 retained_intron Homo_sapiens 5.99756e-43 178
ENST00000485998 CCDC136-008 protein_coding Homo_sapiens 0 577
ENST00000487361 CCDC136-006 protein_coding Homo_sapiens 0 1182
ENST00000494552 CCDC136-005 protein_coding Homo_sapiens 0 1738

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