C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001YA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128617-ENSG00000128596 CGP 9606 7:128772491-128822132
GeneTranscriptPositionBiotype
ENSG00000128596 (CCDC136)
coiled-coil domain containing 136 		ENST00000297788 (CCDC136-001) 128792045-128822130 protein_coding
ENST00000378685 (CCDC136-002) 128791444-128822127 protein_coding
ENST00000459946 (CCDC136-009) 128791410-128794728 protein_coding
ENST00000460941 (CCDC136-013) 128809167-128810196 retained_intron
ENST00000464672 (CCDC136-007) 128806375-128822132 protein_coding
ENST00000464832 (CCDC136-003) 128791450-128822128 protein_coding
ENST00000471729 (CCDC136-014) 128814649-128821885 processed_transcript
ENST00000472049 (CCDC136-010) 128791458-128792428 protein_coding
ENST00000480137 (CCDC136-004) 128801186-128822130 retained_intron
ENST00000485832 (CCDC136-012) 128806747-128807833 retained_intron
ENST00000485998 (CCDC136-008) 128790757-128801250 protein_coding
ENST00000487361 (CCDC136-006) 128792018-128822119 protein_coding
ENST00000488925 (CCDC136-011) 128791618-128794522 protein_coding
ENST00000494552 (CCDC136-005) 128801210-128822125 protein_coding
ENST00000528772 (CCDC136-015) 128805848-128818268 retained_intron
ENSG00000128617 (OPN1SW)
opsin 1 (cone pigments), short-wave-sensitive 		ENST00000249389 (OPN1SW-001) 128772491-128775790 protein_coding
CIL_0001YA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000058831-ENSMUSG00000029769 CGP 10090 6:29376671-29426994
GeneTranscriptPositionBiotype
ENSMUSG00000029767 (Calu)
calumenin 		ENSMUST00000031779 (Calu-001) 29348106-29376675 protein_coding
ENSMUST00000090481 (Calu-002) 29348119-29376129 protein_coding
ENSMUST00000138523 (Calu-004) 29373666-29375031 processed_transcript
ENSMUST00000156163 (Calu-003) 29361461-29373352 protein_coding
ENSMUST00000172607 (Calu-010) 29372553-29377110 protein_coding
ENSMUST00000172974 (Calu-009) 29356477-29374503 protein_coding
ENSMUST00000173216 (Calu-007) 29348069-29374503 protein_coding
ENSMUST00000173694 (Calu-008) 29356477-29374503 protein_coding
ENSMUST00000174096 (Calu-005) 29356477-29374503 nonsense_mediated_decay
ENSMUST00000174280 (Calu-006) 29361224-29372551 protein_coding
ENSMUSG00000029769 (Ccdc136)
coiled-coil domain containing 136 		ENSMUST00000096084 (Ccdc136-201) 29396685-29426994 protein_coding
ENSMUST00000115275 (Ccdc136-001) 29396630-29426953 protein_coding
ENSMUST00000127611 (Ccdc136-003) 29412484-29426952 processed_transcript
ENSMUST00000129846 (Ccdc136-007) 29402905-29410138 processed_transcript
ENSMUST00000132232 (Ccdc136-006) 29396309-29399449 processed_transcript
ENSMUST00000143599 (Ccdc136-005) 29414952-29426954 processed_transcript
ENSMUST00000145310 (Ccdc136-004) 29410077-29426854 processed_transcript
ENSMUST00000154619 (Ccdc136-002) 29411810-29426857 protein_coding
ENSMUST00000180829 (Ccdc136-009) 29398926-29426955 protein_coding
ENSMUST00000181464 (Ccdc136-008) 29398926-29426948 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YA_0001ENSG00000128596ENST00000297788ENST00000378685ENST00000459946ENST00000460941ENST00000464672ENST00000464832ENST00000471729ENST00000472049ENST00000480137ENST00000485832ENST00000485998ENST00000487361ENST00000488925ENST00000494552ENST00000528772ENSG00000128617ENST00000249389CIL_0001YA_0002ENSMUSG00000029767ENSMUST00000031779ENSMUST00000090481ENSMUST00000138523ENSMUST00000156163ENSMUST00000172607ENSMUST00000172974ENSMUST00000173216ENSMUST00000173694ENSMUST00000174096ENSMUST00000174280ENSMUSG00000029769ENSMUST00000096084ENSMUST00000115275ENSMUST00000127611ENSMUST00000129846ENSMUST00000132232ENSMUST00000143599ENSMUST00000145310ENSMUST00000154619ENSMUST00000180829ENSMUST00000181464
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YA_0001ENSG00000128596ENST00000297788ENST00000378685ENST00000459946ENST00000464672ENST00000464832ENST00000471729ENST00000480137ENST00000485832ENST00000487361ENST00000494552ENST00000528772ENSG00000128617ENST00000249389CIL_0001YA_0002ENSMUSG00000029767ENSMUST00000031779ENSMUST00000090481ENSMUST00000172974ENSMUST00000173216ENSMUST00000174096ENSMUSG00000029769ENSMUST00000096084ENSMUST00000115275ENSMUST00000129846ENSMUST00000132232ENSMUST00000143599ENSMUST00000145310ENSMUST00000154619ENSMUST00000180829ENSMUST00000181464
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128596 ENST00000297788 N/A N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000378685 N/A N/A N/A 28.021±0.00 0.423±0.00 2.895±0.00 N/A N/A N/A 0.268±0.00 N/A N/A 0.401±0.00 N/A
ENST00000459946 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.218±0.00 N/A N/A N/A N/A
ENST00000460941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464672 N/A 1.068±0.00 N/A N/A 0.224±0.00 N/A 0.424±0.13 N/A 0.014±0.00 0.251±0.00 N/A N/A 0.130±0.00 N/A
ENST00000464832 N/A 0.714±0.00 N/A 11.997±1.87 N/A 0.350±0.00 N/A N/A N/A N/A N/A 0.315±0.00 N/A N/A
ENST00000471729 0.384±0.00 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A 0.075±0.00 0.258±0.00 102.577±0.00
ENST00000472049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480137 N/A N/A N/A N/A 0.117±0.00 N/A N/A N/A 0.804±0.00 0.031±0.00 N/A N/A 0.076±0.03 N/A
ENST00000485832 N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A
ENST00000485998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A
ENST00000488925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494552 N/A 0.196±0.00 N/A N/A 0.685±0.00 3.204±0.00 N/A N/A 0.525±0.49 N/A 0.143±0.00 0.287±0.15 0.152±0.03 160.914±70.58
ENST00000528772 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.366±0.00 N/A N/A N/A N/A
ENSG00000128617 ENST00000249389 2.966±0.00 N/A 0.100±0.00 N/A 1.775±0.65 1.966±0.00 1.625±1.52 1.239±0.01 0.919±0.32 1.911±0.00 0.902±0.00 0.691±0.48 0.568±0.00 1.983±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029767 ENSMUST00000031779 43.070±16.41 5.141±1.49 88.158±7.22 25.219±14.66 21.941±12.06 11.010±2.13 33.083±3.98 14.071±1.98 25.390±17.60 35.972±11.25 9.168±3.08 32.553±13.51 89.362±41.88 4.867±0.91
ENSMUST00000090481 N/A N/A 24.559±0.00 7.928±0.00 N/A N/A N/A N/A 8.474±0.14 N/A 10.154±1.10 22.287±1.98 53.545±23.60 2.466±0.80
ENSMUST00000138523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 140.510±0.00 N/A 25.326±0.00
ENSMUST00000173216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 190.825±0.00 N/A 54.427±0.00
ENSMUST00000173694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174096 N/A N/A N/A 49.135±0.00 N/A N/A N/A N/A N/A N/A N/A 188.839±0.00 422.153±76.16 38.008±0.00
ENSMUST00000174280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029769 ENSMUST00000096084 N/A N/A N/A 15.101±0.00 N/A N/A N/A 0.189±0.00 0.039±0.00 N/A 0.306±0.05 N/A 0.157±0.00 45.264±0.00
ENSMUST00000115275 2.100±1.85 0.273±0.01 5.060±1.70 N/A 0.482±0.22 0.748±0.42 0.204±0.00 0.492±0.23 0.079±0.01 0.390±0.11 0.895±0.19 1.592±0.59 0.250±0.08 N/A
ENSMUST00000127611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129846 N/A N/A N/A 190.952±0.00 N/A N/A N/A N/A N/A N/A 2.697±0.63 18.587±0.00 2.271±1.40 2551.840±0.00
ENSMUST00000132232 N/A N/A N/A N/A N/A N/A N/A N/A 0.227±0.03 N/A N/A N/A N/A N/A
ENSMUST00000143599 N/A 1.363±0.75 N/A N/A N/A N/A N/A 1.485±0.00 0.088±0.01 1.393±0.00 N/A 7.464±0.00 1.310±0.48 N/A
ENSMUST00000145310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.713±0.00 N/A
ENSMUST00000154619 N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A 0.494±0.00 905.620±1142.13
ENSMUST00000180829 N/A 0.169±0.00 N/A N/A N/A 0.208±0.00 0.472±0.12 0.396±0.01 0.034±0.02 N/A N/A 0.625±0.00 N/A N/A
ENSMUST00000181464 N/A N/A N/A N/A N/A N/A 0.172±0.00 0.103±0.00 N/A N/A 0.371±0.05 N/A 0.195±0.12 N/A

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