C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115366 Slc12a2-201 ENSMUSG00000024597 10090 + 18:57878678-57946821 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115366
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115366 6.960±3.87 7.898±4.11 2.000±0.18 7.087±0.09 70.374±9.06 19.907±2.72 2.804±0.55 3.979±1.08 0.859±0.28 15.956±2.63 11.155±1.57 9.151±3.54 5.170±3.14 2.212±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041L CIL_00041L_0002 CGP 18:57878678-58209926

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0006813 IEA potassium ion transport
GO:0006814 IEA sodium ion transport
GO:0006821 IEA chloride transport
GO:0006972 IEA hyperosmotic response
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0008511 IEA sodium:potassium:chloride symporter activity
GO:0008519 IEA ammonium transmembrane transporter activity
GO:0015696 IEA ammonium transport
GO:0016021 IEA integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0030321 IEA transepithelial chloride transport
GO:0031982 IEA vesicle
GO:0035264 IMP multicellular organism growth
GO:0045795 IEA positive regulation of cell volume
GO:0050910 IMP detection of mechanical stimulus involved in sensory perception of sound
GO:0060444 IMP branching involved in mammary gland duct morphogenesis
GO:0060763 IMP mammary duct terminal end bud growth
GO:0070062 IEA extracellular vesicular exosome
GO:0070634 IEA transepithelial ammonium transport
GO:0072488 IEA ammonium transmembrane transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262461 SLC12A2-001 protein_coding Homo_sapiens 0 4920
ENST00000343225 SLC12A2-004 protein_coding Homo_sapiens 0 3657
ENST00000502849 SLC12A2-007 retained_intron Homo_sapiens 0 449
ENST00000504416 SLC12A2-002 retained_intron Homo_sapiens 0 503
ENST00000507791 SLC12A2-006 processed_transcript Homo_sapiens 0 634
ENST00000509205 SLC12A2-003 nonsense_mediated_decay Homo_sapiens 0 4357
ENST00000509616 SLC12A2-005 retained_intron Homo_sapiens 0 592

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