C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2 variant 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115776 Ube2v2-002 ENSMUSG00000022674 10090 - 16:15555505-15594507 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115776
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115776 1.717±0.51 0.607±0.00 14.786±0.94 18.347±8.71 1.636±0.66 1.691±0.00 2.519±0.52 2.564±1.11 8.263±7.11 1.678±0.35 5.476±0.78 8.779±2.26 10.650±5.49 8.943±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000860 CIL_000860_0002 VISTA 16:14994470-15596046
CIL_000462 CIL_000462_0002 CGP 16:15552677-15637400

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016881 IEA acid-amino acid ligase activity
GO:0042275 IGI error-free postreplication DNA repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000433562 UBE2V2P3-001 processed_pseudogene Homo_sapiens 1.99965e-42 176
ENST00000517630 UBE2V2-006 protein_coding Homo_sapiens 0 335
ENST00000518360 UBE2V2-008 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000520595 UBE2V2-010 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000520809 UBE2V2-002 protein_coding Homo_sapiens 0 942
ENST00000521346 UBE2V2-007 protein_coding Homo_sapiens 0 808
ENST00000521628 UBE2V2-003 retained_intron Homo_sapiens 0 658
ENST00000523111 UBE2V2-001 protein_coding Homo_sapiens 0 974
ENST00000523432 UBE2V2-009 protein_coding Homo_sapiens 0 765

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