C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000860_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm467 VISTA 9606 8:48079293-48680744
GeneTranscriptPositionBiotype
ENSG00000224594 (RPL29P19)
ribosomal protein L29 pseudogene 19 		ENST00000425197 (RPL29P19-001) 48384590-48385049 processed_pseudogene
ENSG00000233858 (AC026904.1)
 ENST00000430626 (AC026904.1-001) 48590401-48594621 lincRNA
ENSG00000253140 (RP11-567J20.3)
 ENST00000521359 (RP11-567J20.3-001) 48515852-48517089 lincRNA
ENSG00000253455 (RP11-770E5.3)
 ENST00000521660 (RP11-770E5.3-001) 48620465-48623895 lincRNA
ENSG00000253608 (RP11-770E5.1)
 ENST00000522575 (RP11-770E5.1-001) 48551567-48698510 antisense
ENSG00000253654 (CTD-2210A23.1)
 ENST00000520250 (CTD-2210A23.1-001) 48294026-48294694 processed_pseudogene
ENSG00000253688 (RP11-567J20.2)
 ENST00000524011 (RP11-567J20.2-001) 48552015-48556441 lincRNA
ENSG00000253702 (RP11-567J20.1)
 ENST00000523038 (RP11-567J20.1-001) 48597458-48621018 lincRNA
ENSG00000253843 (RP11-769N21.2)
 ENST00000519711 (RP11-769N21.2-001) 48193850-48194627 processed_pseudogene
ENSG00000253892 (RP11-770E5.2)
 ENST00000518620 (RP11-770E5.2-001) 48657260-48658894 lincRNA
ENSG00000279881 (RP11-513O13.1)
 ENST00000622926 (RP11-513O13.1-001) 48428143-48431041 TEC
CIL_000860_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm467 VISTA 10090 16:14994470-15596046
GeneTranscriptPositionBiotype
ENSMUSG00000022674 (Ube2v2)
ubiquitin-conjugating enzyme E2 variant 2 		ENSMUST00000096234 (Ube2v2-003) 15556309-15594490 protein_coding
ENSMUST00000115776 (Ube2v2-002) 15555505-15594507 protein_coding
ENSMUST00000115777 (Ube2v2-001) 15552677-15594524 protein_coding
ENSMUST00000118236 (Ube2v2-004) 15555881-15594472 protein_coding
ENSMUSG00000094472 (Gm21897)
predicted gene, 21897 		ENSMUST00000178312 (Gm21897-201) 15317458-15318957 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000860_0001ENSG00000224594ENST00000425197ENSG00000233858ENST00000430626ENSG00000253140ENST00000521359ENSG00000253455ENST00000521660ENSG00000253608ENST00000522575ENSG00000253654ENST00000520250ENSG00000253688ENST00000524011ENSG00000253702ENST00000523038ENSG00000253843ENST00000519711ENSG00000253892ENST00000518620ENSG00000279881ENST00000622926CIL_000860_0002ENSMUSG00000022674ENSMUST00000096234ENSMUST00000115776ENSMUST00000115777ENSMUST00000118236ENSMUSG00000094472ENSMUST00000178312
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000860_0001ENSG00000224594ENST00000425197ENSG00000233858ENST00000430626ENSG00000253140ENST00000521359ENSG00000253455ENST00000521660ENSG00000253608ENST00000522575ENSG00000253654ENST00000520250ENSG00000253688ENST00000524011ENSG00000253702ENST00000523038ENSG00000253843ENST00000519711ENSG00000253892ENST00000518620ENSG00000279881ENST00000622926CIL_000860_0002ENSMUSG00000022674ENSMUST00000096234ENSMUST00000115776ENSMUST00000115777ENSMUST00000118236ENSMUSG00000094472ENSMUST00000178312
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000224594 ENST00000425197 0.086±0.00 1.260±0.00 N/A 0.155±0.00 0.050±0.00 0.184±0.00 0.042±0.00 0.638±0.00 0.291±0.00 0.095±0.00 0.450±0.00 0.370±0.28 1.065±0.03 0.042±0.00
ENSG00000233858 ENST00000430626 0.017±0.00 0.034±0.00 0.121±0.00 N/A 0.092±0.07 0.079±0.07 0.048±0.04 0.067±0.05 0.181±0.00 N/A N/A 0.074±0.03 0.036±0.02 0.051±0.00
ENSG00000253140 ENST00000521359 N/A 0.867±0.00 N/A 0.052±0.00 N/A 0.046±0.00 N/A N/A N/A 0.321±0.28 N/A N/A N/A 0.023±0.00
ENSG00000253455 ENST00000521660 N/A 0.118±0.00 N/A N/A 0.060±0.00 0.277±0.00 N/A N/A N/A N/A N/A 0.386±0.00 0.273±0.03 0.679±0.28
ENSG00000253608 ENST00000522575 0.012±0.00 0.158±0.00 N/A 0.013±0.00 0.022±0.00 0.021±0.02 0.011±0.00 0.085±0.00 0.021±0.00 N/A N/A 0.071±0.04 0.067±0.05 0.156±0.05
ENSG00000253654 ENST00000520250 N/A N/A N/A 0.015±0.00 N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000253688 ENST00000524011 0.044±0.00 0.487±0.00 N/A 0.047±0.00 0.065±0.00 N/A 0.148±0.00 0.084±0.01 0.255±0.18 0.119±0.00 N/A 0.327±0.27 0.316±0.11 0.161±0.02
ENSG00000253702 ENST00000523038 N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A 0.144±0.01
ENSG00000253843 ENST00000519711 N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000253892 ENST00000518620 N/A 0.070±0.00 N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A N/A N/A 0.484±0.18
ENSG00000279881 ENST00000622926 0.091±0.00 0.309±0.00 N/A 0.007±0.00 0.108±0.00 0.016±0.00 0.033±0.00 0.024±0.00 N/A 0.085±0.05 N/A 0.079±0.05 0.043±0.02 0.032±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022674 ENSMUST00000096234 N/A N/A 10.650±0.00 N/A N/A N/A N/A N/A 16.941±4.33 N/A N/A N/A 7.147±1.98 9.170±1.28
ENSMUST00000115776 1.717±0.51 0.607±0.00 14.786±0.94 18.347±8.71 1.636±0.66 1.691±0.00 2.519±0.52 2.564±1.11 8.263±7.11 1.678±0.35 5.476±0.78 8.779±2.26 10.650±5.49 8.943±1.04
ENSMUST00000115777 1.636±0.63 1.781±0.52 4.115±0.69 6.544±3.64 1.425±0.67 1.357±0.39 1.071±0.21 1.636±0.36 3.072±1.22 2.538±0.44 1.224±0.20 2.274±1.00 1.255±1.02 1.305±0.15
ENSMUST00000118236 1.488±0.37 N/A N/A N/A 1.395±0.11 1.010±0.00 N/A 1.345±0.00 2.143±0.00 N/A N/A N/A 7.428±0.00 N/A
ENSMUSG00000094472 ENSMUST00000178312 5.135±1.39 4.118±0.74 13.650±3.18 46.822±24.29 4.964±0.52 2.736±1.13 6.689±0.95 4.991±1.05 8.028±2.24 8.861±3.13 1.916±0.26 7.728±5.73 16.438±3.88 36.848±8.76

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