C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115857 Cabyr-001 ENSMUSG00000024430 10090 + 18:12741324-12755146 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLungMuscleOvaryPlacentaTestisENSMUST00000115857
Transcript ID Adipose Adrenal Breast Colon Lung Muscle Ovary Placenta Testis
ENSMUST00000115857 0.120±0.00 0.032±0.00 0.136±0.03 0.097±0.06 0.061±0.05 0.025±0.01 0.303±0.12 0.121±0.00 59.458±20.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005WT CIL_0005WT_0002 CGP 18:12599926-12755146
CIL_0005WS CIL_0005WS_0002 CGP 18:12741324-12941841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 TAS calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0019722 NAS calcium-mediated signaling
GO:0019899 ISS enzyme binding
GO:0019904 IPI protein domain specific binding
GO:0031514 ISS motile cilium
GO:0035686 IDA sperm fibrous sheath
GO:0046982 IDA protein heterodimerization activity
GO:0048240 NAS sperm capacitation
GO:0051259 NAS protein oligomerization
GO:0097228 IDA sperm principal piece
GO:0097229 IDA sperm end piece

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399481 CABYR-201 protein_coding Homo_sapiens 0 259
ENST00000399496 CABYR-001 protein_coding Homo_sapiens 0 457
ENST00000399499 CABYR-202 protein_coding Homo_sapiens 0 418
ENST00000415309 CABYR-005 protein_coding Homo_sapiens 0 453
ENST00000463087 CABYR-002 nonsense_mediated_decay Homo_sapiens 0 695
ENST00000486759 CABYR-003 nonsense_mediated_decay Homo_sapiens 0 259
ENST00000579102 CABYR-008 protein_coding Homo_sapiens 0 283
ENST00000579956 CABYR-013 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000581397 CABYR-006 protein_coding Homo_sapiens 0 414
ENST00000581872 CABYR-011 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000584752 CABYR-012 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000621648 CABYR-203 protein_coding Homo_sapiens 0 726

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