C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WW domain binding protein 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116514 Wbp11-001 ENSMUSG00000030216 10090 - 6:136813654-136828233 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116514 9.653±1.58 22.923±1.16 14.425±0.73 27.861±10.74 16.076±4.57 15.327±5.43 8.860±2.50 11.401±1.41 16.771±11.59 11.931±4.29 11.242±0.64 23.093±5.29 39.244±19.50 103.700±7.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HB CIL_0003HB_0002 CGP 6:136808244-136828233
CIL_00036X CIL_00036X_0002 CGP 6:136813654-136840536

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006364 IEA rRNA processing
GO:0006397 IEA mRNA processing
GO:0008380 IDA RNA splicing
GO:0008599 IDA protein phosphatase type 1 regulator activity
GO:0016607 IDA nuclear speck
GO:0044822 IEA poly(A) RNA binding
GO:0050699 IEA WW domain binding
GO:0050790 IDA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261167 WBP11-001 protein_coding Homo_sapiens 0 2758
ENST00000445455 RP11-325E14.2-001 processed_pseudogene Homo_sapiens 0 1736
ENST00000535328 WBP11-005 protein_coding Homo_sapiens 0 252
ENST00000535638 WBP11-008 nonsense_mediated_decay Homo_sapiens 0 558
ENST00000544764 WBP11-007 retained_intron Homo_sapiens 0 348
ENST00000562560 WBP11P1-001 transcribed_processed_pseudogene Homo_sapiens 0 976
ENST00000567636 WBP11P1-002 processed_transcript Homo_sapiens 0 1029
ENST00000605511 RP11-96J19.4-001 processed_pseudogene Homo_sapiens 0 409

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