C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cysteine-rich hydrophobic domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116547 Chic1-001 ENSMUSG00000031327 10090 + X:103356476-103396092 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116547
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116547 0.551±0.44 0.523±0.11 1.221±0.13 2.945±0.69 0.293±0.08 0.671±0.14 0.185±0.06 1.090±0.19 0.722±0.48 0.604±0.13 0.056±0.02 1.071±0.31 0.282±0.19 0.151±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006S4 CIL_0006S4_0002 CGP X:103321398-103396092

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0031410 IEA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373502 CHIC1-001 protein_coding Homo_sapiens 0 1720
ENST00000373504 CHIC1-004 protein_coding Homo_sapiens 0 839
ENST00000498318 CHIC1-002 nonsense_mediated_decay Homo_sapiens 0 1229
ENST00000498407 CHIC1-003 nonsense_mediated_decay Homo_sapiens 0 1000

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