C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006S4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131264-ENSG00000204116 CGP 9606 X:73447254-73687102
GeneTranscriptPositionBiotype
ENSG00000131264 (CDX4)
caudal type homeobox 4 		ENST00000373514 (CDX4-001) 73447254-73455245 protein_coding
ENSG00000204116 (CHIC1)
cysteine-rich hydrophobic domain 1 		ENST00000373502 (CHIC1-001) 73563208-73684411 protein_coding
ENST00000373504 (CHIC1-004) 73563200-73687102 protein_coding
ENST00000498318 (CHIC1-002) 73563452-73683215 nonsense_mediated_decay
ENST00000498407 (CHIC1-003) 73563282-73686773 nonsense_mediated_decay
ENSG00000237475 (RPL7P53)
ribosomal protein L7 pseudogene 53 		ENST00000421245 (RPL7P53-001) 73535503-73536241 processed_pseudogene
ENSG00000269904 (MAP2K4P1)
mitogen-activated protein kinase kinase 4 pseudogene 1 		ENST00000438453 (MAP2K4P1-001) 73524961-73526155 transcribed_processed_pseudogene
ENST00000602584 (MAP2K4P1-002) 73524275-73563085 processed_transcript
CIL_0006S4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031326-ENSMUSG00000031327 CGP 10090 X:103321398-103396092
GeneTranscriptPositionBiotype
ENSMUSG00000031326 (Cdx4)
caudal type homeobox 4 		ENSMUST00000033689 (Cdx4-001) 103321398-103330592 protein_coding
ENSMUSG00000031327 (Chic1)
cysteine-rich hydrophobic domain 1 		ENSMUST00000116547 (Chic1-001) 103356476-103396092 protein_coding
ENSMUSG00000081280 (Gm9516)
predicted gene 9516 		ENSMUST00000119684 (Gm9516-001) 103336830-103337253 processed_pseudogene
ENSMUSG00000097953 (Gm26952)
predicted gene, 26952 		ENSMUST00000181996 (Gm26952-001) 103381957-103383169 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S4_0001ENSG00000131264ENST00000373514ENSG00000204116ENST00000373502ENST00000373504ENST00000498318ENST00000498407ENSG00000237475ENST00000421245ENSG00000269904ENST00000438453ENST00000602584CIL_0006S4_0002ENSMUSG00000031326ENSMUST00000033689ENSMUSG00000031327ENSMUST00000116547ENSMUSG00000081280ENSMUST00000119684ENSMUSG00000097953ENSMUST00000181996
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006S4_0001ENSG00000131264ENST00000373514ENSG00000204116ENST00000373502ENST00000373504ENST00000498318ENST00000498407ENSG00000237475ENST00000421245ENSG00000269904ENST00000438453ENST00000602584CIL_0006S4_0002ENSMUSG00000031326ENSMUST00000033689ENSMUSG00000031327ENSMUST00000116547ENSMUSG00000081280ENSMUST00000119684ENSMUSG00000097953ENSMUST00000181996
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131264 ENST00000373514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00
ENSG00000204116 ENST00000373502 N/A N/A N/A N/A N/A N/A N/A 0.281±0.00 0.645±0.00 N/A N/A 1.867±0.00 N/A N/A
ENST00000373504 0.080±0.00 1.382±0.00 N/A 3.607±0.00 1.060±0.38 0.665±0.00 N/A 0.313±0.00 0.181±0.00 0.456±0.00 0.220±0.02 1.589±0.43 0.407±0.01 0.117±0.00
ENST00000498318 N/A N/A 1.252±0.00 2.147±0.00 1.685±0.00 N/A 0.588±0.00 N/A 2.114±0.00 1.082±0.00 N/A N/A N/A N/A
ENST00000498407 N/A N/A 0.833±0.00 N/A N/A N/A N/A N/A N/A 0.692±0.00 0.218±0.00 N/A N/A N/A
ENSG00000237475 ENST00000421245 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A
ENSG00000269904 ENST00000438453 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A 0.019±0.00 0.019±0.00
ENST00000602584 N/A 0.046±0.00 N/A 0.023±0.00 0.004±0.00 0.012±0.00 0.017±0.00 N/A 0.038±0.00 N/A 0.008±0.00 0.022±0.00 N/A 0.008±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031326 ENSMUST00000033689 N/A 0.039±0.00 N/A 0.004±0.00 N/A N/A N/A 0.050±0.01 0.104±0.07 N/A N/A N/A N/A N/A
ENSMUSG00000031327 ENSMUST00000116547 0.551±0.44 0.523±0.11 1.221±0.13 2.945±0.69 0.293±0.08 0.671±0.14 0.185±0.06 1.090±0.19 0.722±0.48 0.604±0.13 0.056±0.02 1.071±0.31 0.282±0.19 0.151±0.04
ENSMUSG00000081280 ENSMUST00000119684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.480±0.00 N/A N/A
ENSMUSG00000097953 ENSMUST00000181996 0.395±0.00 N/A N/A N/A 0.383±0.00 0.467±0.00 N/A 0.266±0.09 0.344±0.30 N/A N/A 1.054±0.73 0.026±0.01 0.173±0.00

Loading