C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglycerate mutase 1, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117129 Pgam1-ps2-001 ENSMUSG00000082016 10090 - 7:27469771-27470535 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117129
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117129 16.942±3.97 12.250±2.74 4.191±1.02 16.317±11.50 11.301±2.64 5.387±1.00 2.937±1.39 9.100±4.56 7.045±7.02 3.030±0.56 0.165±0.07 13.863±8.72 3.215±2.71 1.309±0.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000008287 pgam1a-001 protein_coding Danio_rerio 0 497
ENST00000334828 PGAM1-001 protein_coding Homo_sapiens 0 1031
ENST00000402426 PGAM1P10-001 processed_pseudogene Homo_sapiens 0 739
ENST00000436071 PGAM1P2-001 processed_pseudogene Homo_sapiens 0 296
ENST00000458128 PGAM4-001 protein_coding Homo_sapiens 0 970
ENST00000467867 PGAM1-003 processed_transcript Homo_sapiens 0 809
ENST00000473929 PGAM1-004 processed_transcript Homo_sapiens 0 224
ENST00000503887 PGAM1P9-001 processed_pseudogene Homo_sapiens 0 623
ENST00000547454 RP11-490H24.5-001 processed_pseudogene Homo_sapiens 0 1031
ENST00000548270 RP11-887P2.3-001 processed_pseudogene Homo_sapiens 0 1026

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