C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglycerate mutase 1 (brain)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334828 PGAM1-001 ENSG00000171314 9606 + 10:97426160-97433441 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334828
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334828 41.049±0.00 59.774±0.00 8.963±0.00 83.003±26.94 31.269±21.67 34.689±22.46 29.562±22.26 50.195±37.48 27.328±13.05 29.498±22.25 6.162±3.83 52.863±23.90 104.275±34.90 44.113±19.53

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004082 IEA bisphosphoglycerate mutase activity
GO:0004083 IEA bisphosphoglycerate 2-phosphatase activity
GO:0004619 IMP:IEA phosphoglycerate mutase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0005975 TAS carbohydrate metabolic process
GO:0006006 TAS glucose metabolic process
GO:0006094 TAS gluconeogenesis
GO:0006096 IDA:IEA glycolytic process
GO:0006110 IDA regulation of glycolytic process
GO:0016020 IDA membrane
GO:0016311 IEA dephosphorylation
GO:0016868 IEA intramolecular transferase activity, phosphotransferases
GO:0019901 IPI protein kinase binding
GO:0043456 IDA regulation of pentose-phosphate shunt
GO:0044281 TAS small molecule metabolic process
GO:0045730 IDA respiratory burst
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000011896 Pgam1-201 protein_coding Mus_musculus 0 1194
ENSMUST00000117129 Pgam1-ps2-001 processed_pseudogene Mus_musculus 0 1031
ENSMUST00000119107 Pgam1-ps1-001 processed_pseudogene Mus_musculus 0 830

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