C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13384
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117166 Gm13384-001 ENSMUSG00000082332 10090 - 2:6132208-6133956 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainKidneyLiverOvaryPlacentaTestisENSMUST00000117166
Transcript ID Adipose Adrenal Bladder Brain Kidney Liver Ovary Placenta Testis
ENSMUST00000117166 0.027±0.00 0.052±0.00 0.021±0.00 0.006±0.00 0.028±0.00 0.007±0.00 0.393±0.22 0.036±0.03 0.137±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EV CIL_0008EV_0002 VISTA 2:5960988-6562915

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331456 TRAIP-001 protein_coding Homo_sapiens 0 597
ENST00000469027 TRAIP-005 protein_coding Homo_sapiens 0 327
ENST00000473195 TRAIP-004 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000473863 TRAIP-011 processed_transcript Homo_sapiens 0 307
ENST00000477546 TRAIP-002 retained_intron Homo_sapiens 0 422
ENST00000482243 TRAIP-009 protein_coding Homo_sapiens 0 420
ENST00000482582 TRAIP-007 protein_coding Homo_sapiens 0 335
ENST00000489948 TRAIP-010 retained_intron Homo_sapiens 2.00386e-43 180
ENST00000491060 TRAIP-003 retained_intron Homo_sapiens 6e-35 152

Loading