C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008EV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1382 VISTA 9606 10:11379308-11980769
GeneTranscriptPositionBiotype
ENSG00000134463 (ECHDC3)
enoyl CoA hydratase domain containing 3 		ENST00000379215 (ECHDC3-001) 11742366-11764070 protein_coding
ENST00000420401 (ECHDC3-004) 11742446-11755581 protein_coding
ENST00000422887 (ECHDC3-005) 11747275-11763351 protein_coding
ENST00000495787 (ECHDC3-003) 11747450-11755730 processed_transcript
ENST00000496136 (ECHDC3-002) 11742366-11764070 processed_transcript
ENSG00000148426 (PROSER2)
proline and serine rich 2 		ENST00000277570 (PROSER2-005) 11823398-11872277 protein_coding
ENST00000379200 (PROSER2-001) 11869644-11870875 protein_coding
ENST00000444604 (PROSER2-003) 11831683-11866647 protein_coding
ENST00000474155 (PROSER2-004) 11823339-11866776 processed_transcript
ENST00000622831 (PROSER2-201) 11823398-11870872 protein_coding
ENSG00000148429 (USP6NL)
USP6 N-terminal like 		ENST00000277575 (USP6NL-201) 11460510-11532275 protein_coding
ENST00000379237 (USP6NL-005) 11460510-11573737 protein_coding
ENST00000443016 (USP6NL-003) 11563187-11573496 processed_transcript
ENST00000606752 (USP6NL-002) 11564127-11611666 processed_transcript
ENST00000609104 (USP6NL-001) 11453946-11611754 protein_coding
ENST00000609853 (USP6NL-004) 11564127-11573841 protein_coding
ENSG00000225778 (PROSER2-AS1)
PROSER2 antisense RNA 1 		ENST00000445498 (PROSER2-AS1-001) 11849608-11894700 antisense
ENST00000453242 (PROSER2-AS1-002) 11857289-11874795 antisense
ENSG00000251957 (RNU6-1095P)
RNA, U6 small nuclear 1095, pseudogene 		ENST00000516148 (RNU6-1095P-201) 11923181-11923288 snRNA
ENSG00000271046 (RP11-138I18.2)
 ENST00000604086 (RP11-138I18.2-001) 11679675-11680514 lincRNA
ENSG00000273781 (AL138898.1)
 ENST00000617108 (AL138898.1-201) 11927351-11927441 miRNA
ENSG00000280086 (RP11-544P1.3)
 ENST00000624657 (RP11-544P1.3-001) 11395808-11398792 TEC
CIL_0008EV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1382 VISTA 10090 2:5960988-6562915
GeneTranscriptPositionBiotype
ENSMUSG00000039046 (Usp6nl)
USP6 N-terminal like 		ENSMUST00000042503 (Usp6nl-003) 6352733-6443494 protein_coding
ENSMUST00000114937 (Usp6nl-001) 6322667-6446390 protein_coding
ENSMUST00000132391 (Usp6nl-002) 6322772-6421012 processed_transcript
ENSMUST00000150515 (Usp6nl-004) 6420922-6424835 processed_transcript
ENSMUSG00000039063 (Echdc3)
enoyl Coenzyme A hydratase domain containing 3 		ENSMUST00000042658 (Echdc3-001) 6188465-6213033 protein_coding
ENSMUST00000114941 (Echdc3-003) 6206006-6212979 protein_coding
ENSMUST00000132810 (Echdc3-002) 6189509-6196208 processed_transcript
ENSMUSG00000043241 (Upf2)
UPF2 regulator of nonsense transcripts homolog (yeast) 		ENSMUST00000060092 (Upf2-001) 5951469-6056703 protein_coding
ENSMUST00000128200 (Upf2-002) 6023339-6056698 protein_coding
ENSMUST00000144901 (Upf2-003) 6050427-6055502 processed_transcript
ENSMUSG00000045319 (Proser2)
proline and serine rich 2 		ENSMUST00000054254 (Proser2-002) 6100025-6130146 protein_coding
ENSMUST00000114942 (Proser2-001) 6100045-6130211 protein_coding
ENSMUST00000126551 (Proser2-003) 6101190-6130139 protein_coding
ENSMUSG00000082332 (Gm13384)
predicted gene 13384 		ENSMUST00000117166 (Gm13384-001) 6132208-6133956 processed_pseudogene
ENSMUSG00000085716 (Gm13388)
predicted gene 13388 		ENSMUST00000126659 (Gm13388-001) 6431786-6436033 antisense
ENSMUSG00000086109 (Gm13391)
predicted gene 13391 		ENSMUST00000128589 (Gm13391-001) 6472272-6472903 lincRNA
ENSMUST00000147685 (Gm13391-002) 6472000-6478619 lincRNA
ENSMUSG00000087125 (A230108P19Rik)
RIKEN cDNA A230108P19 gene 		ENSMUST00000151782 (A230108P19Rik-001) 6193251-6321611 antisense
ENSMUSG00000087485 (Gm13383)
predicted gene 13383 		ENSMUST00000131190 (Gm13383-001) 6255946-6257266 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008EV_0001ENSG00000134463ENST00000379215ENST00000420401ENST00000422887ENST00000495787ENST00000496136ENSG00000148426ENST00000277570ENST00000379200ENST00000444604ENST00000474155ENST00000622831ENSG00000148429ENST00000277575ENST00000379237ENST00000443016ENST00000606752ENST00000609104ENST00000609853ENSG00000225778ENST00000445498ENST00000453242ENSG00000251957ENST00000516148ENSG00000271046ENST00000604086ENSG00000273781ENST00000617108ENSG00000280086ENST00000624657CIL_0008EV_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008EV_0001ENSG00000134463ENST00000379215ENST00000422887ENST00000495787ENST00000496136ENSG00000148426ENST00000277570ENST00000379200ENST00000444604ENST00000474155ENST00000622831ENSG00000148429ENST00000277575ENST00000379237ENST00000609104ENSG00000225778ENST00000445498ENST00000453242ENSG00000251957ENST00000516148ENSG00000271046ENST00000604086ENSG00000273781ENST00000617108ENSG00000280086ENST00000624657CIL_0008EV_0002ENSMUSG00000039046ENSMUST00000042503ENSMUST00000114937ENSMUSG00000039063ENSMUST00000042658ENSMUST00000114941ENSMUSG00000043241ENSMUST00000060092ENSMUST00000128200ENSMUSG00000045319ENSMUST00000054254ENSMUST00000114942ENSMUST00000126551ENSMUSG00000082332ENSMUST00000117166ENSMUSG00000085716ENSMUST00000126659ENSMUSG00000086109ENSMUST00000128589ENSMUST00000147685ENSMUSG00000087125ENSMUST00000151782ENSMUSG00000087485ENSMUST00000131190
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134463 ENST00000379215 49.995±0.00 N/A 5.075±0.00 0.340±0.22 34.375±0.00 2.097±0.00 15.587±13.17 19.199±9.69 35.337±34.80 6.002±0.00 33.426±26.43 4.851±3.78 6.410±1.64 8.684±0.00
ENST00000420401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422887 N/A N/A 5.737±0.00 0.088±0.00 1.570±0.00 1.318±0.00 2.706±0.00 6.479±0.00 1.071±0.00 N/A 2.694±0.00 N/A N/A N/A
ENST00000495787 N/A N/A N/A N/A N/A N/A N/A N/A 0.504±0.00 N/A N/A N/A N/A N/A
ENST00000496136 N/A 0.764±0.00 N/A 0.655±0.00 0.720±0.00 N/A N/A N/A N/A N/A N/A 0.531±0.00 1.648±0.00 6.222±0.00
ENSG00000148426 ENST00000277570 N/A 0.058±0.00 0.209±0.00 N/A 0.396±0.00 0.278±0.20 0.083±0.02 1.525±0.00 1.385±1.36 1.644±0.00 N/A 0.990±0.36 3.919±0.30 0.745±0.00
ENST00000379200 1.552±0.00 N/A N/A N/A N/A 0.586±0.25 N/A 3.152±0.00 10.023±0.00 7.426±0.00 0.375±0.00 N/A N/A N/A
ENST00000444604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.352±0.00 N/A N/A N/A
ENST00000474155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.861±0.00 N/A N/A
ENST00000622831 1.708±0.00 0.297±0.00 N/A N/A 0.250±0.00 1.656±0.00 N/A 1.730±0.00 4.725±0.00 5.248±0.00 N/A 3.373±2.63 11.210±0.00 3.580±0.85
ENSG00000148429 ENST00000277575 2.565±0.00 3.566±0.00 1.080±0.00 1.098±0.81 1.957±0.12 1.862±0.00 0.881±0.35 1.109±0.00 1.634±0.01 3.186±0.36 0.401±0.15 3.623±0.79 2.513±0.09 12.996±3.56
ENST00000379237 N/A N/A N/A 1.147±0.00 N/A 0.848±0.00 N/A 2.188±0.00 N/A N/A N/A 4.105±0.00 N/A N/A
ENST00000443016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609104 0.480±0.00 N/A 0.249±0.00 0.218±0.01 0.460±0.03 0.438±0.10 0.233±0.15 0.440±0.02 0.283±0.04 0.515±0.00 0.072±0.00 0.947±0.52 0.330±0.16 1.020±0.47
ENST00000609853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225778 ENST00000445498 N/A N/A N/A 0.012±0.00 0.090±0.00 N/A 0.033±0.00 N/A 0.050±0.00 N/A 0.106±0.00 N/A 4.923±0.66 2.750±0.78
ENST00000453242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A N/A N/A
ENSG00000251957 ENST00000516148 N/A 0.918±0.00 N/A 0.178±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.162±0.00
ENSG00000271046 ENST00000604086 N/A 1.707±0.00 N/A 0.178±0.00 0.033±0.00 0.046±0.00 0.109±0.00 0.115±0.00 0.117±0.00 0.105±0.00 0.015±0.00 0.072±0.04 0.074±0.00 0.087±0.05
ENSG00000273781 ENST00000617108 N/A 1.077±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280086 ENST00000624657 N/A N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A 0.017±0.00 0.035±0.00 0.550±0.27
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039046 ENSMUST00000042503 2.387±1.26 1.749±0.61 0.588±0.00 3.901±1.00 1.906±0.46 2.971±0.75 0.402±0.09 1.468±0.48 1.882±0.75 3.083±0.37 0.186±0.04 3.104±0.87 4.106±2.57 2.832±0.26
ENSMUST00000114937 1.312±0.72 2.447±0.00 2.782±0.46 2.356±0.61 1.349±0.51 3.367±0.92 0.539±0.17 2.300±0.80 2.373±0.96 3.413±1.04 0.646±0.14 3.760±1.22 2.651±0.33 1.890±0.42
ENSMUST00000132391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039063 ENSMUST00000042658 16.983±3.75 33.987±7.66 2.385±0.49 0.269±0.15 14.112±5.64 5.472±1.00 13.639±2.57 30.752±7.63 44.663±33.02 5.901±0.77 2.153±0.53 11.414±3.28 2.117±1.30 1.350±0.67
ENSMUST00000114941 N/A 53.085±28.46 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.446±0.00 0.328±0.00
ENSMUST00000132810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000043241 ENSMUST00000060092 0.685±0.32 0.756±0.24 4.186±1.18 6.072±4.75 0.800±0.29 0.707±0.15 1.016±0.29 0.946±0.36 3.311±1.13 1.568±0.44 4.183±0.46 5.054±5.90 5.686±2.03 10.159±10.51
ENSMUST00000128200 1.439±0.61 0.502±0.32 3.749±0.00 4.281±3.48 0.940±0.28 0.946±0.17 0.508±0.13 1.144±0.41 1.537±0.92 1.376±0.42 1.919±0.43 2.937±3.47 4.814±3.79 3.036±1.73
ENSMUST00000144901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000045319 ENSMUST00000054254 0.903±0.69 1.871±0.78 2.908±0.42 0.277±0.00 0.809±0.40 1.494±0.41 N/A 0.779±0.22 1.097±0.65 0.692±0.05 0.240±0.00 1.665±0.40 5.622±3.33 0.261±0.08
ENSMUST00000114942 2.374±1.53 3.525±0.56 8.602±0.30 0.696±0.14 0.977±0.42 5.143±0.62 1.590±0.26 2.141±0.29 4.898±3.31 2.752±0.47 0.246±0.09 5.001±1.56 6.652±3.65 0.495±0.17
ENSMUST00000126551 N/A N/A N/A N/A 0.511±0.00 N/A N/A N/A N/A N/A 0.191±0.07 1.670±0.38 4.980±2.32 0.411±0.00
ENSMUSG00000082332 ENSMUST00000117166 0.027±0.00 0.052±0.00 0.021±0.00 0.006±0.00 N/A N/A N/A 0.028±0.00 0.007±0.00 N/A N/A 0.393±0.22 0.036±0.03 0.137±0.08
ENSMUSG00000085716 ENSMUST00000126659 0.117±0.00 N/A N/A N/A N/A 0.464±0.00 N/A N/A 0.160±0.09 N/A N/A N/A 1.637±0.84 N/A
ENSMUSG00000086109 ENSMUST00000128589 0.310±0.00 N/A N/A 0.438±0.00 N/A N/A N/A N/A 0.208±0.00 N/A N/A 1.409±0.45 1.284±0.00 N/A
ENSMUST00000147685 0.109±0.05 0.132±0.05 N/A 0.171±0.00 0.387±0.34 0.098±0.00 N/A 0.087±0.03 0.042±0.03 0.079±0.02 N/A 0.405±0.22 0.235±0.12 N/A
ENSMUSG00000087125 ENSMUST00000151782 N/A 0.057±0.00 N/A 0.024±0.01 0.035±0.00 0.039±0.00 N/A 0.031±0.01 0.016±0.01 0.020±0.00 N/A 0.041±0.00 0.013±0.00 0.326±0.00
ENSMUSG00000087485 ENSMUST00000131190 N/A N/A N/A 0.061±0.00 N/A N/A N/A 0.028±0.00 N/A N/A 0.045±0.00 N/A 0.193±0.24 0.095±0.00

Loading